RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MKRN2OSH3BPM6 223 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 EIF3FO00303 357 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 ZNF780AO75290 641 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 SCAF4O95104 1147 aaKnown RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 FUT1P19526 365 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 ADPRHP54922 357 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 WNT7BP56706 349 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 ADPRMQ3LIE5 342 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 HBMQ6B0K9 141 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 NAA40Q86UY6 237 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 FJX1Q86VR8 437 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 TP53INP2Q8IXH6 220 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 ADGRF3Q8IZF5 1079 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 EGLN3Q9H6Z9 239 aa7.6□□□□□ -1.19
VPS41-202ENST00000310301 WSB2Q9NYS7 404 aaPredicted RBP7.6□□□□□ -1.19
VPS41-202ENST00000310301 DFFBO76075 338 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SDC1P18827 310 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SEC61A1P61619 476 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 CTBSQ01459 385 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 HABP2Q14520 560 aaPredicted RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 ARHGAP19Q14CB8 494 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 HLA-BQ31612 363 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 MANEALQ5VSG8 457 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 FAM185AQ8N0U4 392 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CSNK1A1LQ8N752 337 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CLDN22Q8N7P3 220 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 OR1E3Q8WZA6 343 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ARRDC3Q96B67 414 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 KCTD12Q96CX2 325 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 BOCQ9BWV1 1114 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 NXF5Q9H1B4 397 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 PIGMQ9H3S5 423 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 IFT22Q9H7X7 185 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 NUDT21O43809 227 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 ACTL6BO94805 426 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 GABARAPO95166 117 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SMIM18P0DKX4 95 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SERPINA2P20848 420 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 PRDX3P30048 256 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 CLDN12P56749 244 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 STARD6P59095 220 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ARG2P78540 354 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 TNFRSF17Q02223 184 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ADIRFQ15847 76 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SLC22A6Q4U2R8 563 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 EXOSC6Q5RKV6 272 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 CD276Q5ZPR3 534 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SLC6A19Q695T7 634 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 BRICD5Q6PL45 260 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 Q6ZS52 159 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 GPR137CQ8N3F9 429 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 OR4K15Q8NH41 348 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 LGALS14Q8TCE9 139 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 C22orf15Q8WYQ4 148 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 DDIT4LQ96D03 193 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 RTP4Q96DX8 246 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SEC22CQ9BRL7 303 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 HCAR1Q9BXC0 346 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 C1orf123Q9NWV4 160 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CLEC1BQ9P126 229 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 TRAV27A0A087WT01 109 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 A0A0J9YY10 115 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CEBPZOSA8MTT3 80 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SULT1C4O75897 302 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 OR2C1O95371 312 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 FOLR1P15328 257 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 GCAP28676 217 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CRABP1P29762 137 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ETV6P41212 452 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 AKR1C1Q04828 323 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 PGGHGQ32M88 737 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 FAM199XQ6PEV8 388 aaPredicted RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 COX15Q7KZN9 410 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 KLHDC8AQ8IYD2 350 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 TBC1D20Q96BZ9 403 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 SORCS2Q96PQ0 1159 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 GSX2Q9BZM3 304 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ULBP3Q9BZM4 244 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ZNF160Q9HCG1 818 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 FBXL4Q9UKA2 621 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 USP22Q9UPT9 525 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 OSGIN2Q9Y236 505 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 KIF13BQ9NQT8 1826 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CSO75390 466 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 APEHP13798 732 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 G0S2P27469 103 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 LAP3P28838 519 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 POLR2IP36954 125 aaKnown RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 OPRD1P41143 372 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 CCR2P41597 374 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 HCCSP53701 268 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 HOXC5Q00444 222 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 MFGE8Q08431 387 aaPredicted RBP7.59□□□□□ -1.19
VPS41-202ENST00000310301 GBX1Q14549 363 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 C6orf132Q5T0Z8 1188 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 ZNF836Q6ZNA1 936 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 UEVLDQ8IX04 471 aa7.59□□□□□ -1.19
VPS41-202ENST00000310301 GPR26Q8NDV2 337 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms