RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 JMJD6Q6NYC1 403 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PODNL1Q6PEZ8 512 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PLET1Q6UQ28 207 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CREB3L2Q70SY1 520 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PRSS42Q7Z5A4 293 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 NANOGNBQ7Z5D8 188 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ZER1Q7Z7L7 766 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 C17orf64Q86WR6 236 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 NUDT13Q86X67 352 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PLXDC1Q8IUK5 500 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 DCUN1D3Q8IWE4 304 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 LAX1Q8IWV1 398 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 POGLUT1Q8NBL1 392 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MORN4Q8NDC4 146 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 C19orf18Q8NEA5 215 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 FDCSPQ8NFU4 85 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TTLQ8NG68 377 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 OR4K5Q8NGD3 323 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 OR56A1Q8NGH5 318 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 OR2L2Q8NH16 312 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 VANGL1Q8TAA9 524 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SUN3Q8TAQ9 357 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ENKURQ8TC29 256 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SLC7A13Q8TCU3 470 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 OSTF1Q92882 214 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CIDECQ96AQ7 238 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 RGMAQ96B86 450 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SLC41A2Q96JW4 573 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SLC35G5Q96KT7 338 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 LRR1Q96L50 414 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 NEDD4LQ96PU5 975 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SLC38A2Q96QD8 506 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 GPHA2Q96T91 129 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MNTQ99583 582 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 MARVELD1Q9BSK0 173 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 KATNB1Q9BVA0 655 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 FNDC11Q9BVV2 318 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF717Q9BY31 904 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 NDEL1Q9GZM8 345 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 C11orf54Q9H0W9 315 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 DDX31Q9H8H2 851 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 EVA1AQ9H8M9 152 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TRIM45Q9H8W5 580 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 RMI1Q9H9A7 625 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 FOLH1BQ9HBA9 442 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TRIM39Q9HCM9 518 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TIGARQ9NQ88 270 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 RPRD1BQ9NQG5 326 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF275Q9NSD4 429 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SIRT3Q9NTG7 399 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ING3Q9NXR8 418 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TAS2R16Q9NYV7 291 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 TVP23BQ9NYZ1 205 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 DNAJC27Q9NZQ0 273 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SEC14L3Q9UDX4 400 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 EPHA6Q9UF33 1036 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 CLEC2DQ9UHP7 191 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PADI1Q9ULC6 663 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 LIPT1Q9Y234 373 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 EXOGQ9Y2C4 368 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 PCDHGA9Q9Y5G4 932 aaKnown RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 SPIN1Q9Y657 262 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-201ENST00000308987 DNAJC13O75165 2243 aa4.46□□□□□ -1.7
CKS1B-201ENST00000308987 ANK3Q12955 4377 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 GSAPA4D1B5 854 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OR5K4A6NMS3 321 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 GPR89AB7ZAQ6 455 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 C21orf140B9A014 251 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 M0R129 80 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 AP3D1O14617 1153 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TOX3O15405 576 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 LYRM1O43325 122 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SSX4O60224 188 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM127O75204 238 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TOX4O94842 621 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 GPR89BP0CG08 455 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 LIMS3P0CW19 117 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 LIMS4P0CW20 117 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 NR2F1P10589 423 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SLC2A2P11168 524 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TNNI3P19429 210 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 M6PRP20645 277 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FPR3P25089 353 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 PKLRP30613 574 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 NTSP30990 170 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 KIR2DL3P43628 341 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TSFMP43897 325 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 MTNR1BP49286 362 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ETV1P50549 477 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 CCR8P51685 355 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 RAG2P55895 527 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FOXL2P58012 376 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SLAMF1Q13291 335 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 MAB21L1Q13394 359 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 EFR3AQ14156 821 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TRAM2Q15035 370 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SNAPC1Q16533 368 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 DECR1Q16698 335 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SPDYE7PQ495Y7 208 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms