RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CBLP22681 906 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 TGFBR3Q03167 851 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 KRTAP21-3Q3LHN1 58 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 PHYHD1Q5SRE7 291 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF613Q6PF04 617 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 Q71RC1 249 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 PATL1Q86TB9 770 aaKnown RBP17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 OR8J3Q8NGG0 315 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 C10orf82Q8WW14 230 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF583Q96ND8 569 aa17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF317Q96PQ6 595 aaPredicted RBP17.31■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF503-AS2A6NEH8 195 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 CHP2O43745 196 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 HEXAP06865 529 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF43P17038 809 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 TTKP33981 857 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 NCALDP61601 193 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 KRTAP1-1Q07627 177 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 ENTPD8Q5MY95 495 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 KLHL17Q6TDP4 642 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 RANBP3LQ86VV4 465 aaPredicted RBP17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 SLC30A8Q8IWU4 369 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 SCAIQ8N9R8 606 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 MAGEE2Q8TD90 523 aaPredicted RBP17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 OR2M2Q96R28 347 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 DHRS9Q9BPW9 319 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 PRSS27Q9BQR3 290 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 BDH2Q9BUT1 245 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 MRGBPQ9NV56 204 aa17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 MRPL39Q9NYK5 338 aaKnown RBP17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 CRNNQ9UBG3 495 aaPredicted RBP17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 GDF2Q9UK05 429 aaPredicted RBP17.3■□□□□ 0.36
PDZRN3-202ENST00000308537 ARPC4-TTLL3A0A0A6YYG9 625 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 IGHV1-18A0A0C4DH31 117 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 OR6C65A6NJZ3 312 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF587BE7ETH6 402 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 CDH2P19022 906 aaPredicted RBP17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 PRPS1P60891 318 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 ROR2Q01974 943 aaKnown RBP17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 TNK1Q13470 666 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 CYLC2Q14093 348 aaPredicted RBP17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 SLC22A25Q6T423 547 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 CLEC9AQ6UXN8 241 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 SNX32Q86XE0 403 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 ANKK1Q8NFD2 765 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 ADAMTS16Q8TE57 1224 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 OBP2BQ9NPH6 170 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 CORINQ9Y5Q5 1042 aa17.29■□□□□ 0.36
PDZRN3-202ENST00000308537 CPSF4LA6NMK7 179 aaKnown RBP17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 BBIP1A8MTZ0 92 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 MRASO14807 208 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 NPPAP01160 153 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 IGLV1-44P01699 117 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 GTF2E2P29084 291 aaKnown RBP17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 MFSD13AQ14CX5 517 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 ABHD12BQ7Z5M8 362 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 MYPOPQ86VE0 399 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 VANGL1Q8TAA9 524 aaPredicted RBP17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 TXNDC15Q96J42 360 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 EPYCQ99645 322 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 SEC61A2Q9H9S3 476 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 GPR35Q9HC97 309 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 SLC13A4Q9UKG4 626 aa17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 YLPM1P49750 1951 aaKnown RBP17.28■□□□□ 0.36
PDZRN3-202ENST00000308537 LOC100653049A0A140TA62 436 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 ATP6V1G2-DDX39BF2Z307 99 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 PLPP3O14495 311 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 KRT34O76011 436 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 VIMP08670 466 aaKnown RBP17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 ACVR1BP36896 505 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 TUBA1BP68363 451 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 TUBA4AP68366 448 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 VEZF1Q14119 521 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 ZNF74Q16587 644 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 INTS11Q5TA45 600 aaKnown RBP17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 TUBA1AQ71U36 451 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 EMC6Q9BV81 110 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 CBLN4Q9NTU7 201 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 MED29Q9NX70 200 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 ARMCX1Q9P291 453 aa17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 GMPR2Q9P2T1 348 aaKnown RBP17.27■□□□□ 0.36
PDZRN3-202ENST00000308537 RTTNQ86VV8 2226 aa17.27■□□□□ 0.35
PDZRN3-202ENST00000308537 A0A096LPE4 126 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 A0A1W2PPZ6 126 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 SMAD7O15105 426 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC43A1O75387 559 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 IGKV3-15P01624 115 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 TNFRSF1BP20333 461 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 MDH1P40925 334 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 SH3BGRP55822 239 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 ARF1P84077 181 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 PUDPQ08623 228 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 ETFDHQ16134 617 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 CLEC12BQ2HXU8 276 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 MST1LQ2TV78 715 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 CEACAM16Q2WEN9 425 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 AGAP6Q5VW22 663 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 ZNF544Q6NX49 715 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 ANKRD16Q6P6B7 361 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms