RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SPNP16150 400 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 RPS27AP62979 156 aaKnown RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 UBA52P62987 128 aaKnown RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 ABHD17BQ5VST6 288 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 BORAQ6PGQ7 559 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 OR1S2Q8NGQ3 325 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 GPR150Q8NGU9 434 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 VPS25Q9BRG1 176 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 MRC1P22897 1456 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 NFKBIEO00221 500 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 C1orf105O95561 183 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CPT2P23786 658 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 HOXA11P31270 313 aaPredicted RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 PRPS1P60891 318 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 RAB11AP62491 216 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 C11orf42Q8N5U0 333 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 ZBTB44Q8NCP5 570 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 PTGESO14684 152 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 SPINK4O60575 86 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 PGGHGQ32M88 737 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CCSMST1Q4G0I0 132 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 SVBPQ8N300 66 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 EID2Q8N6I1 236 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CBLCQ9ULV8 474 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 AIFM1O95831 613 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 DEFA4P12838 97 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 SLC14A2Q15849 920 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 ADPRMQ3LIE5 342 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 MARCH3Q86UD3 253 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 SFT2D1Q8WV19 159 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 PINX1Q96BK5 328 aaKnown RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 SLC12A9Q9BXP2 914 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CHST6Q9GZX3 395 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CPNE5Q9HCH3 593 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CHST2Q9Y4C5 530 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 MED1Q15648 1581 aaPredicted RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 IAPPP10997 89 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CTRB1P17538 263 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 CTRB2Q6GPI1 263 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 TIPARPQ7Z3E1 657 aaKnown RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 MAVSQ7Z434 540 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 FAM58AQ8N1B3 248 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 OR4A16Q8NH70 328 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 TOE1Q96GM8 510 aaKnown RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 SDK1Q7Z5N4 2213 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 SULT1C2O00338 296 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 YKT6O15498 198 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 FUCA1P04066 466 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 PPP3CBP16298 524 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ACHEP22303 614 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 MYADMQ96S97 322 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 GINS3Q9BRX5 216 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ZNF416Q9BWM5 594 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 C1SP09871 688 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 FOLR3P41439 243 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 BIDP55957 195 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 CLEC14AQ86T13 490 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 MS4A15Q8N5U1 240 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ZNF740Q8NDX6 193 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 SHDQ96IW2 340 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 PLSCR5A0PG75 271 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 GAPDHSO14556 408 aaPredicted RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 DNAJB1P25685 340 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 RBMS1P29558 406 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 WDR5P61964 334 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 USP51Q70EK9 711 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 C17orf78Q8N4C9 275 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 OR56B4Q8NH76 319 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 NANPQ8TBE9 248 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ZNF296Q8WUU4 475 aaPredicted RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 CHTF18Q8WVB6 975 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 RNASET2O00584 256 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 CRXO43186 299 aaPredicted RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 DEFB103AP81534 67 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ZXDAP98168 799 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 RPL7L1Q6DKI1 246 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 C1QTNF2Q9BXJ5 285 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 MCOLN1Q9GZU1 580 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 CCL26Q9Y258 94 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 PDCD1Q15116 288 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 FAM3CQ92520 227 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 RBPMSQ93062 196 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 RAB3CQ96E17 227 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 OR6C1Q96RD1 312 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 A0A087WUU8 490 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 SSSCA1O60232 199 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 CA3P07451 260 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ACP2P11117 423 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 CRABP1P29762 137 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 ZNF91Q05481 1191 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 TMUB2Q71RG4 321 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms