RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZNF573Q86YE8 665 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 CNTN4Q8IWV2 1026 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 TUSC5Q8IXB3 177 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 APH1BQ8WW43 257 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 GSTO2Q9H4Y5 243 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SPATA31A5Q5VU36 1347 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SPATA31A7Q8IWB4 1347 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 OR10A3P58181 314 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SIM1P81133 766 aaPredicted RBP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 LY6G5CQ5SRR4 150 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ADAMTS18Q8TE60 1221 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 DTD1Q8TEA8 209 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 AMDHD1Q96NU7 426 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 MACROD1Q9BQ69 325 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 AK3Q9UIJ7 227 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 EFSO43281 561 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 IRF4Q15306 451 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 KLHDC1Q8N7A1 406 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ELOVL3Q9HB03 270 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 STARD5Q9NSY2 213 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 RIMS3Q9UJD0 308 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 DEPDC5O75140 1603 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 NKX6-3A6NJ46 265 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SLC6A19Q695T7 634 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 DEFB132Q7Z7B7 95 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 IGDCC3Q8IVU1 814 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SMOQ99835 787 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 POPDC3Q9HBV1 291 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 DOC2AQ14183 400 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ZFP62Q8NB50 900 aaPredicted RBP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SCAMP4Q969E2 229 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF566Q969W8 418 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 LPAR4Q99677 370 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SORBS1Q9BX66 1292 aaKnown RBP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 C20orf85Q9H1P6 137 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 U3KQ87 197 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 C5orf52A6NGY3 159 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 NHSL2Q5HYW2 709 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 TOR2AQ5JU69 321 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 RABEPKQ7Z6M1 372 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 OR4F15Q8NGB8 312 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 NPSR1Q6W5P4 371 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ACOXLQ9NUZ1 547 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 HEMK1Q9Y5R4 338 aaPredicted RBP12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SGK494L7N484 410 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 PBX1P40424 430 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 H3F3AP84243 136 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 COMMD6Q7Z4G1 85 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ASB17Q8WXJ9 295 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 KPTNQ9Y664 436 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ARNTP27540 789 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 AHRP35869 848 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ENPP4Q9Y6X5 453 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 H3BQ06 376 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF623O75123 536 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 LAMP1P11279 417 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 GRAMD2AQ8IUY3 354 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 LEFTY2O00292 366 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 HHEXQ03014 270 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 GDPGP1Q6ZNW5 385 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ARRDC3Q96B67 414 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 RASD2Q96D21 266 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TMEM43Q9BTV4 400 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 SPACA1Q9HBV2 294 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TEX50A0A1B0GTY4 177 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 GABRPO00591 440 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 PRAMEF11O60813 436 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 PCGF2P35227 344 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 NPY4RP50391 375 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 EIF4HQ15056 248 aaKnown RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TXNRD3NBQ6F5E7 133 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TIFABQ6ZNK6 161 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TMIGD2Q96BF3 282 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 IKZF5Q9H5V7 419 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 NGBQ9NPG2 151 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 OR7C2O60412 319 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 H2AFB1P0C5Y9 115 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TMEM18Q96B42 140 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 TMUB2Q71RG4 321 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 COMMD1Q8N668 190 aa12.49□□□□□ -0.41
TRIM56-201ENST00000306085 OR52B6Q8NGF0 335 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms