RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 MPEG1Q2M385 716 aa12.24□□□□□ -0.45
DDX54-201ENST00000306014 OR5M10Q6IEU7 315 aa12.24□□□□□ -0.45
DDX54-201ENST00000306014 RTL10Q7L3V2 364 aa12.24□□□□□ -0.45
DDX54-201ENST00000306014 NDUFAF7Q7L592 441 aa12.24□□□□□ -0.45
DDX54-201ENST00000306014 ZSCAN1Q8NBB4 408 aa12.24□□□□□ -0.45
DDX54-201ENST00000306014 NECAB3Q96P71 396 aaPredicted RBP12.24□□□□□ -0.45
DDX54-201ENST00000306014 H3BML4 177 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 RAD52P43351 418 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PCBP4P57723 403 aaKnown RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 ALKBH1Q13686 389 aaKnown RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 ZNF628Q5EBL2 1059 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 ZNF547Q8IVP9 402 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 OR10K1Q8NGX5 313 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TRMT61AQ96FX7 289 aaKnown RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 SIRT3Q9NTG7 399 aaPredicted RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 GLS2Q9UI32 602 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 KCND3Q9UK17 655 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 NPIPB8E9PQR5 432 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 ZNF593O00488 134 aaPredicted RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 GPR171O14626 319 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 NTN1O95631 604 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PXKQ7Z7A4 578 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 WDR34Q96EX3 536 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PIAS3Q9Y6X2 628 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PLA2G10O15496 165 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 KNG1P01042 644 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 CD14P08571 375 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TACR3P29371 465 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 OVCH1Q7RTY7 1134 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 OR5T2Q8NGG2 359 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 NPRL2Q8WTW4 380 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 GIMAP5Q96F15 307 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 SLC2A4RGQ9NR83 387 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 MAN2C1Q9NTJ4 1040 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 FBXO9Q9UK97 447 aaPredicted RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 VDAC3Q9Y277 283 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TMEM212A6NML5 194 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 M0QYG6 137 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 SDC3O75056 442 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 FBLP22087 321 aaKnown RBP12.23□□□□□ -0.45
DDX54-201ENST00000306014 CDK2P24941 298 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PER3P56645 1201 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 RAB38P57729 211 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TLE3Q04726 772 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 FGL2Q14314 439 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 CDK5R1Q15078 307 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 STEAP1BQ6NZ63 245 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TEX261Q6UWH6 196 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 ADAMTS18Q8TE60 1221 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PAQR8Q8TEZ7 354 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 PHYHIPQ92561 330 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 DIO2Q92813 273 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TSSK2Q96PF2 358 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 U3KQ87 197 aa12.23□□□□□ -0.45
DDX54-201ENST00000306014 TMEM269A0A1B0GVZ9 245 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 H0Y8X5 98 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 ZNF264O43296 627 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 RBMXL2O75526 392 aaKnown RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 CRABP1P29762 137 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 POU3F4P49335 361 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 ZNF616Q08AN1 781 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 GPR139Q6DWJ6 353 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 ZNF704Q6ZNC4 412 aaPredicted RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 PLPP7Q8NBV4 271 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 OR1E3Q8WZA6 343 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 ARL11Q969Q4 196 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 SHDQ96IW2 340 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 FAM71F1Q96KD3 344 aaPredicted RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 PRRT1Q99946 306 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 MARVELD1Q9BSK0 173 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 TSPAN10Q9H1Z9 355 aaPredicted RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 HRASLSQ9HDD0 168 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 SDHAF2Q9NX18 166 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 KLK11Q9UBX7 282 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 A0A1B0GV50 99 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 hCG_1807616A0A1W2PRN6 198 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 EPXP11678 715 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 ENDOUP21128 410 aaKnown RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 RABIFP47224 123 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 VAMP2P63027 116 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 MEP1BQ16820 701 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 PLEKHN1Q494U1 663 aaPredicted RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 SHISA6Q6ZSJ9 500 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 WDR77Q9BQA1 342 aaPredicted RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 POM121BA6NF01 834 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 RFXAPO00287 272 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 GCM2O75603 506 aaPredicted RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 GLCEO94923 617 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 TAGLNQ01995 201 aaKnown RBP12.22□□□□□ -0.45
DDX54-201ENST00000306014 PGAM5Q96HS1 289 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 PRRG4Q9BZD6 226 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
DDX54-201ENST00000306014 SLC6A20Q9NP91 592 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms