RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 DBPQ10586 325 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 FOXF2Q12947 444 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PDK3Q15120 406 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ANKDD1AQ495B1 522 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SLC36A3Q495N2 470 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PDSS1Q5T2R2 415 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ARMC4Q5T2S8 1044 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TMEM236Q5W0B7 351 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SMARCD3Q6STE5 483 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PXKQ7Z7A4 578 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 CCDC71Q8IV32 467 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 GALNT4Q8N4A0 578 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 WNT2BQ93097 391 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 OXGR1Q96P68 337 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TRIB1Q96RU8 372 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TTYH2Q9BSA4 534 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SF3B5Q9BWJ5 86 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 ASPNQ9BXN1 380 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GABARAPL3Q9BY60 117 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GRIP2Q9C0E4 1043 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TIGARQ9NQ88 270 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PAPOLBQ9NRJ5 636 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 POFUT2Q9Y2G5 429 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ADAM18Q9Y3Q7 739 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 FLVCR1Q9Y5Y0 555 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 CDH10Q9Y6N8 788 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SLC22A20A6NK97 555 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 ZAR1LA6NP61 321 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 C11orf98E9PRG8 122 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 IMPA2O14732 288 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 ZNF432O94892 652 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 NDUFB2O95178 105 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 RCBTB2O95199 551 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 IGHMP01871 453 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 CD14P08571 375 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 IGFBP5P24593 272 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 KIR2DL2P43627 348 aaPredicted RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 GIPRP48546 466 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 CRISP1P54107 249 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 NUP107P57740 925 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 PRPS1P60891 318 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 RASGEF1BQ0VAM2 473 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 NPRL3Q12980 569 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 PTGES3Q15185 160 aaKnown RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 ZIK1Q3SY52 487 aaPredicted RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 ALG10Q5BKT4 473 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 C1orf185Q5T7R7 199 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 TMEM225Q6GV28 225 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 NUFIP2Q7Z417 695 aaKnown RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 NANOGNBQ7Z5D8 188 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 MED12LQ86YW9 2145 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 TUSC5Q8IXB3 177 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 SLC43A2Q8N370 569 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 PACRGLQ8N7B6 248 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 GALNT11Q8NCW6 608 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 OR9K2Q8NGE7 335 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 ZNF519Q8TB69 540 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 DNAJC9Q8WXX5 260 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 TSPAN32Q96QS1 320 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 NAA11Q9BSU3 229 aaPredicted RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 TP63Q9H3D4 680 aaPredicted RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 TOR3AQ9H497 397 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 KRT84Q9NSB2 600 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 ZNF346Q9UL40 294 aaKnown RBP8.43□□□□□ -1.06
RFX3-201ENST00000302303 CLEC4AQ9UMR7 237 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 RASD1Q9Y272 281 aa8.43□□□□□ -1.06
RFX3-201ENST00000302303 NBASA2RRP1 2371 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 NPIPB13A6NJU9 1138 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 FIGNL2A6NMB9 653 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 ZNF724A8MTY0 619 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 NPIPB4C9JG80 1138 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 PRRG2O14669 202 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 ARPC3O15145 178 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 SS18L1O75177 396 aaPredicted RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 TNFSF13O75888 250 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 VAMP5O95183 116 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 PPP1R3DO95685 299 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 TXNDC12O95881 172 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 CGAP01215 116 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 HIST1H2ABP04908 130 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 HOXD4P09016 255 aaPredicted RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 IFNGR1P15260 489 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 GNLYP22749 145 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 AHCYP23526 432 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 PTGER4P35408 488 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 TIMP3P35625 211 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 AQP4P55087 323 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 CTXN1P60606 82 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 ESRRGP62508 458 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 ERVK-25P63136 954 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 ADARB1P78563 741 aaKnown RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 ACKR1Q16570 336 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 EIF2S3LQ2VIR3 472 aaKnown RBP8.42□□□□□ -1.06
RFX3-201ENST00000302303 CLEC12AQ5QGZ9 265 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 DPY19L2P2Q6ZN68 376 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 HIST3H2AQ7L7L0 130 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 TMEM123Q8N131 208 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 LNX2Q8N448 690 aa8.42□□□□□ -1.06
RFX3-201ENST00000302303 IQCF1Q8N6M8 205 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms