RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 SLC35F3Q8IY50 421 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 ZNF595Q8IYB9 648 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 TOE1Q96GM8 510 aaKnown RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 GPX7Q96SL4 187 aaPredicted RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 ELF4Q99607 663 aaPredicted RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 RTN4RQ9BZR6 473 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 OR10A4Q9H209 315 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 RANBP3Q9H6Z4 567 aaPredicted RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 DLL4Q9NR61 685 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 FRRS1LQ9P0K9 344 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 MEIKINA0A087WXM9 373 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 SHISA7A6NL88 538 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 A8MUA0 341 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 G3V3Q6 166 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 MEN1O00255 615 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 SSNA1O43805 119 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 WISP1O95388 367 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 TMIGD3P0DMS9 266 aaPredicted RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 PSMD4P55036 377 aaKnown RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 PRPS1P60891 318 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 SLC22A10Q63ZE4 541 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 TEX261Q6UWH6 196 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 SYNPRQ8TBG9 265 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 PHOSPHO1Q8TCT1 267 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 KTI12Q96EK9 354 aaPredicted RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 ADAD1Q96M93 576 aaKnown RBP12.4□□□□□ -0.42
BCCIP-202ENST00000299130 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 UCKL1Q9NWZ5 548 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 COPZ2Q9P299 210 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 FOXJ3Q9UPW0 622 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 U3KQ87 197 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 V9GY05 133 aa12.4□□□□□ -0.42
BCCIP-202ENST00000299130 TMEM131Q92545 1883 aa12.4□□□□□ -0.43
BCCIP-202ENST00000299130 CLDN4O14493 209 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 GRK6P43250 576 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 LBX1P52954 281 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 LIPNQ5VXI9 398 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 PWWP2BQ6NUJ5 590 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 BAIAP2L2Q6UXY1 529 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 STAC2Q6ZMT1 411 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 ZNF782Q6ZMW2 699 aaPredicted RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 JAZF1Q86VZ6 243 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 PIAS4Q8N2W9 510 aaPredicted RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 OR2T4Q8NH00 348 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 OR10AC1Q8NH08 325 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 OR56B4Q8NH76 319 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 LPAR4Q99677 370 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 NANSQ9NR45 359 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 ING1Q9UK53 422 aaPredicted RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 MRPS33Q9Y291 106 aaKnown RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 HIF3AQ9Y2N7 669 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 VCANP13611 3396 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 NOS1APO75052 506 aaPredicted RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 TOXO94900 526 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 TPOP07202 933 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 CD14P08571 375 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 GABRA4P48169 554 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 VEGFCP49767 419 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 SKP2Q13309 424 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 IL10RAQ13651 578 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 GRM7Q14831 915 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 ISXQ2M1V0 245 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 ODF4Q2M2E3 257 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 WBP2NLQ6ICG8 309 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 Q6ZS52 159 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 SLC16A9Q7RTY1 509 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 PRR22Q8IZ63 422 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 C7orf50Q9BRJ6 194 aaKnown RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 SPRTNQ9H040 489 aaPredicted RBP12.39□□□□□ -0.43
BCCIP-202ENST00000299130 WDR76Q9H967 626 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 PLEKHA1Q9HB21 404 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 MMP17Q9ULZ9 603 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 GON4LQ3T8J9 2241 aa12.39□□□□□ -0.43
BCCIP-202ENST00000299130 TRAV8-7A0A075B6U6 113 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 ZNF749O43361 778 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 TPD52L2O43399 206 aaKnown RBP12.38□□□□□ -0.43
BCCIP-202ENST00000299130 AKR7A3O95154 331 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 NSA2O95478 260 aaKnown RBP12.38□□□□□ -0.43
BCCIP-202ENST00000299130 MPC2O95563 127 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 ABHD16AO95870 558 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 RAF1P04049 648 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 ENPP1P22413 925 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 CDK2P24941 298 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 GFERP55789 205 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 HSF2Q03933 536 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
BCCIP-202ENST00000299130 MESTQ5EB52 335 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms