RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 UBE2NP61088 152 aaKnown RBP21.93■■□□□ 1.1
U2AF1-201ENST00000291552 SQLEQ14534 574 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 C5orf46Q6UWT4 87 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 CXXC5Q7LFL8 322 aaKnown RBP21.93■■□□□ 1.1
U2AF1-201ENST00000291552 KRT73Q86Y46 540 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 PTOV1Q86YD1 416 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 ADPRHL1Q8NDY3 354 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 DNAJA4Q8WW22 397 aaPredicted RBP21.93■■□□□ 1.1
U2AF1-201ENST00000291552 ZNF317Q96PQ6 595 aaPredicted RBP21.93■■□□□ 1.1
U2AF1-201ENST00000291552 OR2M2Q96R28 347 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 SPATA5L1Q9BVQ7 753 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 CA10Q9NS85 328 aa21.93■■□□□ 1.1
U2AF1-201ENST00000291552 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.93■■□□□ 1.1
U2AF1-201ENST00000291552 SVEP1Q4LDE5 3571 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 A8MV72 311 aaPredicted RBP21.92■■□□□ 1.1
U2AF1-201ENST00000291552 SLC43A1O75387 559 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 IGKV3-15P01624 115 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 BGLAPP02818 100 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 HLA-DOBP13765 273 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 RGS8P57771 180 aaPredicted RBP21.92■■□□□ 1.1
U2AF1-201ENST00000291552 VLDLRP98155 873 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 C3orf36Q3SXR2 165 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 PHYHD1Q5SRE7 291 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 FAM91A1Q658Y4 838 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 ULK3Q6PHR2 472 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 NHLRC1Q6VVB1 395 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 H1FNTQ75WM6 255 aaPredicted RBP21.92■■□□□ 1.1
U2AF1-201ENST00000291552 ANKK1Q8NFD2 765 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 SLC41A3Q96GZ6 507 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 ZNF385DQ9H6B1 395 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 PMF1-BGLAPU3KQ54 211 aa21.92■■□□□ 1.1
U2AF1-201ENST00000291552 FBN3Q75N90 2809 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 A0A087WUJ7 227 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 LOC102725191A0A1B0GVB3 256 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 MS4A18H0YCH9 400 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 F12P00748 615 aaPredicted RBP21.91■■□□□ 1.1
U2AF1-201ENST00000291552 CRYAAP02489 173 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 PCBP3P57721 371 aaKnown RBP21.91■■□□□ 1.1
U2AF1-201ENST00000291552 HGFACQ04756 655 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 SELPLGQ14242 412 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 OR1Q1Q15612 314 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 ADIPOQQ15848 244 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 CEACAM16Q2WEN9 425 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 MS4A18Q3C1V0 323 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 FAM169BQ8N8A8 192 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 SLC47A1Q96FL8 570 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 MOGAT1Q96PD6 335 aa21.91■■□□□ 1.1
U2AF1-201ENST00000291552 VWC2LB2RUY7 222 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 SEC14L2O76054 403 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 CSF3P09919 207 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 BMP4P12644 408 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 HOXB1P14653 301 aaPredicted RBP21.9■■□□□ 1.1
U2AF1-201ENST00000291552 SLC6A2P23975 617 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 C1DQ13901 141 aaKnown RBP21.9■■□□□ 1.1
U2AF1-201ENST00000291552 RUNDC3AQ59EK9 446 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 NET1Q7Z628 596 aaPredicted RBP21.9■■□□□ 1.1
U2AF1-201ENST00000291552 RETREG3Q86VR2 466 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 ANKS4BQ8N8V4 417 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 HIPK4Q8NE63 616 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 THOC1Q96FV9 657 aaKnown RBP21.9■■□□□ 1.1
U2AF1-201ENST00000291552 KCNS3Q9BQ31 491 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 CRLF2Q9HC73 371 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 CORO2BQ9UQ03 480 aa21.9■■□□□ 1.1
U2AF1-201ENST00000291552 PRORSD1PA6NEY8 169 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 LRRN3E7EW58 273 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 MFN2O95140 757 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 IGHV4-31P0DP07 118 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 CBR1P16152 277 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 PAX7P23759 505 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 SERPINF1P36955 418 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 NCALDP61601 193 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 SNRPD2P62316 118 aaKnown RBP21.89■■□□□ 1.09
U2AF1-201ENST00000291552 DHDDSQ86SQ9 333 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 ARMC8Q8IUR7 673 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 GPR137CQ8N3F9 429 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 OR6S1Q8NH40 331 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 STON2Q8WXE9 905 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 ZNF607Q96SK3 696 aa21.89■■□□□ 1.09
U2AF1-201ENST00000291552 EVPLLA8MZ36 301 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 M0R3H8 397 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 PDE5AO76074 875 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 OR4A8P0C604 315 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 ZNF16P17020 682 aaPredicted RBP21.88■■□□□ 1.09
U2AF1-201ENST00000291552 IDH3GP51553 393 aaPredicted RBP21.88■■□□□ 1.09
U2AF1-201ENST00000291552 CDH12P55289 794 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 IL1RL1Q01638 556 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 EFNB3Q15768 340 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 NPTX1Q15818 432 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 VHLLQ6RSH7 139 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 C20orf196Q8IYI0 205 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 SMYD1Q8NB12 490 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 PIK3C3Q8NEB9 887 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 GPR32P1Q8NGA4 272 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 DYDC1Q8WWB3 177 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 PROX1Q92786 737 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 ARHGDIGQ99819 225 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 EMC6Q9BV81 110 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 TMEM27Q9HBJ8 222 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 MED29Q9NX70 200 aa21.88■■□□□ 1.09
U2AF1-201ENST00000291552 ANGPT4Q9Y264 503 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms