RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 FANCFQ9NPI8 374 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 BATF3Q9NR55 127 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PLSCR2Q9NRY7 297 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 SPRR3Q9UBC9 169 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 A0A087WXM4 84 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 NPIPA5E9PKD4 350 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 C11orf98E9PRG8 122 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 ARPC3O15145 178 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 WISP2O76076 250 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 PPP1R3DO95685 299 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 CLPTM1O96005 669 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 HMGN1P05114 100 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 F13BP05160 661 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 TFAP2AP05549 437 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 CD14P08571 375 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 HTR1AP08908 422 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 P2RY4P51582 365 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 AGFG1P52594 562 aaKnown RBP16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 CTXN1P60606 82 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 TUBA4AP68366 448 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 SLC35A2P78381 396 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 FOXK2Q01167 660 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 SLC25A30Q5SVS4 291 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 C19orf48Q6RUI8 117 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 FAM26EQ8N5C1 309 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 MEIOBQ8N635 442 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 Q8NA96 180 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 SLC38A2Q96QD8 506 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 RHNO1Q9BSD3 238 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 KATNB1Q9BVA0 655 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 TIGARQ9NQ88 270 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 NPIPA1Q9UND3 350 aa16.93■□□□□ 0.3
PDLIM3-202ENST00000284770 AQP7P3A6NL99 342 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SURF4O15260 269 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 CPN1P15169 458 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 GRK5P34947 590 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 EIF1AXP47813 144 aaKnown RBP16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SRYQ05066 204 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SNAPC1Q16533 368 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF773Q6PK81 442 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ZHX1-C8orf76Q96EF9 292 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ERMAPQ96PL5 475 aaPredicted RBP16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 NAA11Q9BSU3 229 aaPredicted RBP16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SRXN1Q9BYN0 137 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 INIPQ9NRY2 104 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 TPRKBQ9Y3C4 175 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ADAM18Q9Y3Q7 739 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 IER3IP1Q9Y5U9 82 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ZZEF1O43149 2961 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ATMQ13315 3056 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 A0A1W2PNV4 684 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SH3D21A4FU49 640 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF814B7Z6K7 855 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 AQP7O14520 342 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 TLX2O43763 284 aaPredicted RBP16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 IDH3BO43837 385 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 CXCL13O43927 109 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 FAM20BO75063 409 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 APEHP13798 732 aaKnown RBP16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 EEF1B2P24534 225 aaKnown RBP16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 NOS3P29474 1203 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 ERVK-25P63136 954 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 OCLNQ16625 522 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 FAM180AQ6UWF9 173 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 PXKQ7Z7A4 578 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 KDM8Q8N371 416 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 TEX19Q8NA77 164 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 TMEM163Q8TC26 289 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SLC25A18Q9H1K4 315 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 CLN6Q9NWW5 311 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 SCN3BQ9NY72 215 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 TNFRSF10DQ9UBN6 386 aa16.92■□□□□ 0.3
PDLIM3-202ENST00000284770 PTGES3LE9PB15 166 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 ENTPD6O75354 484 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 NUDT6P53370 316 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 RPS3AP61247 264 aaKnown RBP16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 SLC35F1Q5T1Q4 408 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 TMEM225Q6GV28 225 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 ARHGAP11AQ6P4F7 1023 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 FAM122BQ7Z309 247 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 ANKK1Q8NFD2 765 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 CPNE4Q96A23 557 aaPredicted RBP16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 WDYHV1Q96HA8 205 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 FKBP14Q9NWM8 211 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 PAQR5Q9NXK6 330 aaPredicted RBP16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 B3GAT1Q9P2W7 334 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 PSORS1C1Q9UIG5 152 aa16.91■□□□□ 0.3
PDLIM3-202ENST00000284770 LOC102725191A0A1B0GVB3 256 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 IMPA2O14732 288 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 SFTPCP11686 197 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 KLK2P20151 261 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 ENPP1P22413 925 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 MLLT10P55197 1068 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 PIGFQ07326 219 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF362Q5T0B9 420 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 BCDIN3DQ7Z5W3 292 aaKnown RBP16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF540Q8NDQ6 660 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF845Q96IR2 970 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 Q96MT0 163 aa16.9■□□□□ 0.3
PDLIM3-202ENST00000284770 OXGR1Q96P68 337 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms