RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 OR10A5Q9H207 317 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 HINT3Q9NQE9 182 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ENAMQ9NRM1 1142 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 EXTL2Q9UBQ6 330 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SHANK1Q9Y566 2161 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 GPR89AB7ZAQ6 455 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ZIC2O95409 532 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 MPC2O95563 127 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 GPR89BP0CG08 455 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ACVR2AP27037 513 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 MRPL19P49406 292 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ZNF425Q6IV72 752 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 C3P1Q6ZMU1 363 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 PDCD1LG2Q9BQ51 273 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 HHATLQ9HCP6 504 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 LYARQ9NX58 379 aaKnown RBP12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 COPS7AQ9UBW8 275 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SERTAD3Q9UJW9 196 aa12.97□□□□□ -0.33
TNFRSF11A-201ENST00000269485 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 HLA-DMAP28067 261 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SMCO1Q147U7 214 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 NTRK2Q16620 822 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 IRAK1BP1Q5VVH5 260 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 GPALPP1Q8IXQ4 340 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 CA13Q8N1Q1 262 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 PIGUQ9H490 435 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 METTL17Q9H7H0 456 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SLC2A4RGQ9NR83 387 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ACSS1Q9NUB1 689 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 TMEM45AQ9NWC5 275 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SULT1B1O43704 296 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SPDEFO95238 335 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 HOXB9P17482 250 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 CXCR1P25024 350 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ASAH1Q13510 395 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SSX1Q16384 188 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 COL28A1Q2UY09 1125 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 PLAG1Q6DJT9 500 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 LRRN1Q6UXK5 716 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 RELL2Q8NC24 303 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 ADAMTS14Q8WXS8 1223 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 CCDC74AQ96AQ1 378 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 Q96M85 177 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 TMEM38AQ9H6F2 299 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 PCDHGB1Q9Y5G3 927 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 SLC22A7Q9Y694 548 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 MAP1AP78559 2803 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 FREM3P0C091 2139 aa12.96□□□□□ -0.33
TNFRSF11A-201ENST00000269485 CSO75390 466 aaKnown RBP12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LGI1O95970 557 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FBLP22087 321 aaKnown RBP12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ADH7P40394 386 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 GRK6P43250 576 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 CCR6P51684 374 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OR12D2P58182 307 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TOMM34Q15785 309 aaPredicted RBP12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DECR1Q16698 335 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 GLYR1Q49A26 553 aaPredicted RBP12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SYT14P1Q58G82 188 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 NLRC3Q7RTR2 1065 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 TMEM99Q8N816 258 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 FCRL1Q96LA6 429 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 NELL2Q99435 816 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 NPAS1Q99742 590 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 POT1Q9NUX5 634 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 A3GALT2U3KPV4 340 aa12.96□□□□□ -0.34
TNFRSF11A-201ENST00000269485 A0A1B0GW55 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LINC00862A6NCI5 91 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 UNC119BA6NIH7 251 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ARPC5O15511 151 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SEC14L5O43304 696 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LAMTOR5O43504 91 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 RNF13O43567 381 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 HEXBP07686 556 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4L2P0CJ85 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4L3P0CJ86 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4L4P0CJ87 422 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4L5P0CJ88 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4L6P0CJ89 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4L7P0CJ90 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 PTHLHP12272 177 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 OTX2P32243 289 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZNF454Q8N9F8 522 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ADAMTS18Q8TE60 1221 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 ZDHHC12Q96GR4 267 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DDOQ99489 341 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 BCL2L14Q9BZR8 327 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DUX4Q9UBX2 424 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 AK6Q9Y3D8 172 aaKnown RBP12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 DOCK10Q96BY6 2186 aa12.95□□□□□ -0.34
TNFRSF11A-201ENST00000269485 H0YIG0 161 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms