RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 USP43Q70EL4 1123 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 MDGA2Q7Z553 956 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 IL22RA1Q8N6P7 574 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 ZFP41Q8N8Y5 198 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 POMGNT2Q8NAT1 580 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 MFSD8Q8NHS3 518 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 UFD1Q92890 307 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 THOC3Q96J01 351 aaKnown RBP10.43□□□□□ -0.74
SCAF11-201ENST00000266589 SGCZQ96LD1 299 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 JSRP1Q96MG2 331 aaPredicted RBP10.43□□□□□ -0.74
SCAF11-201ENST00000266589 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 ISG20L2Q9H9L3 353 aaKnown RBP10.43□□□□□ -0.74
SCAF11-201ENST00000266589 EXOSC4Q9NPD3 245 aaKnown RBP10.43□□□□□ -0.74
SCAF11-201ENST00000266589 RYDENQ9NUL5 291 aaKnown RBP10.43□□□□□ -0.74
SCAF11-201ENST00000266589 IL17BQ9UHF5 180 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 STUB1Q9UNE7 303 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 CAB39Q9Y376 341 aaPredicted RBP10.43□□□□□ -0.74
SCAF11-201ENST00000266589 CORINQ9Y5Q5 1042 aa10.43□□□□□ -0.74
SCAF11-201ENST00000266589 SNPHO15079 494 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 AKAP8O43823 692 aaKnown RBP10.42□□□□□ -0.74
SCAF11-201ENST00000266589 IMPDH2P12268 514 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 UGT2B10P36537 528 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 NAA10P41227 235 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ACTC1P68032 377 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ACTA1P68133 377 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 TPBGQ13641 420 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 MFSD13AQ14CX5 517 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 DGUOKQ16854 277 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.42□□□□□ -0.744e-7■■■■■ 30.7
SCAF11-201ENST00000266589 ADCK1Q86TW2 530 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 KLBQ86Z14 1044 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 BEST3Q8N1M1 668 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 KBTBD8Q8NFY9 601 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 OR1J4Q8NGS1 313 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ADAMTS17Q8TE56 1095 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 PSMF1Q92530 271 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 NKD1Q969G9 470 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ZBTB8AQ96BR9 441 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 NTNG2Q96CW9 530 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 TSSK2Q96PF2 358 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 TIMP4Q99727 224 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 POTEKPQ9BYX7 375 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 TMEM185BQ9H7F4 350 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 A0A1W2PQL4 384 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-201ENST00000266589 FAM171A2A8MVW0 826 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ARHGEF9O43307 516 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 GLCEO94923 617 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 RENP00797 406 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 TFP02787 698 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 P04436 131 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 LIFP15018 202 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 PYCR1P32322 319 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ACVR1BP36896 505 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 EIF1P41567 113 aaKnown RBP10.42□□□□□ -0.74
SCAF11-201ENST00000266589 CRYBB2P43320 205 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 SERPINB10P48595 397 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 DIO1P49895 249 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ZNF85Q03923 595 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ACSM1Q08AH1 577 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ACKR1Q16570 336 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 GLYR1Q49A26 553 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-201ENST00000266589 TMPRSS12Q86WS5 348 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 EXD3Q8N9H8 876 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 SCAIQ8N9R8 606 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 NXPE2Q96DL1 559 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 GNRHR2Q96P88 292 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 ALG12Q9BV10 488 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
SCAF11-201ENST00000266589 RPH3AQ9Y2J0 694 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-201ENST00000266589 A0A087WZY1 265 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 ANKRD33BA6NCL7 494 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 LIPT2A6NK58 231 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 XKRYO14609 159 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 LRRTM2O43300 516 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 IGHMP01871 453 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 OPN1LWP04000 364 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 DPP4P27487 766 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 ADH6P28332 368 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 RBMS1P29558 406 aaKnown RBP10.41□□□□□ -0.74
SCAF11-201ENST00000266589 HCCSP53701 268 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 RPL27P61353 136 aaKnown RBP10.41□□□□□ -0.74
SCAF11-201ENST00000266589 RPS25P62851 125 aaKnown RBP10.41□□□□□ -0.74
SCAF11-201ENST00000266589 TUBA1BP68363 451 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 PUDPQ08623 228 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 C19orf57Q0VDD7 668 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 MYBPHQ13203 477 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 SELENBP1Q13228 472 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 DCAF10Q5QP82 559 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 LINC01590Q5TEZ4 76 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 JMJD6Q6NYC1 403 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-201ENST00000266589 LYPD4Q6UWN0 246 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 TUBA1AQ71U36 451 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 H1FNTQ75WM6 255 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-201ENST00000266589 SSX6Q7RTT6 188 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 SLC35F2Q8IXU6 374 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 KDM8Q8N371 416 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 RFLNBQ8N5W9 214 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 ARIH2OSQ8N7S6 290 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 ZNF519Q8TB69 540 aa10.41□□□□□ -0.74
SCAF11-201ENST00000266589 TMEM203Q969S6 136 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms