RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 WISP3O95389 354 aaPredicted RBP13.94□□□□□ -0.18
CASC3-201ENST00000264645 OVCH1Q7RTY7 1134 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 SFXN5Q8TD22 340 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 NPAS1Q99742 590 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 OR8D2Q9GZM6 311 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 GPATCH2Q9NW75 528 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 NTMQ9P121 344 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 NCDNQ9UBB6 729 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 ATG4BQ9Y4P1 393 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 F5P12259 2224 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 CD3DP04234 171 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 TIMP2P16035 220 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 CAV2P51636 162 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 CLDN6P56747 220 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 BATFQ16520 125 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 CBLN2Q8IUK8 224 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 RNF113BQ8IZP6 322 aaKnown RBP13.94□□□□□ -0.18
CASC3-201ENST00000264645 OR11H4Q8NGC9 324 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 WFIKKN2Q8TEU8 576 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 URGCP-MRPS24S4R325 110 aa13.94□□□□□ -0.18
CASC3-201ENST00000264645 IGLON5A6NGN9 336 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 BET1O15155 118 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 AK1P00568 194 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 IFNA10P01566 189 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 IFNA4P05014 189 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 SULT1A3P0DMM9 295 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 SULT1A4P0DMN0 295 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 ADH5P11766 374 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 CTNNB1P35222 781 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 CSRP3P50461 194 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 EPHA4P54764 986 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 PRRT3Q5FWE3 981 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 ERN2Q76MJ5 926 aaKnown RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 TEX19Q8NA77 164 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 PLPP7Q8NBV4 271 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 CHRDQ9H2X0 955 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 PCDHGA9Q9Y5G4 932 aaKnown RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 TMPRSS11DO60235 418 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 MAGEB1P43366 347 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 RAG2P55895 527 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 OR4C16Q8NGL9 310 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 CNTNAP3Q9BZ76 1288 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 ELOVL3Q9HB03 270 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 ASH2LQ9UBL3 628 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 NQO2P16083 231 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 TAS2R31P59538 309 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 PRPS1P60891 318 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 ARF3P61204 181 aaPredicted RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 ARF1P84077 181 aaKnown RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 HSD17B13Q7Z5P4 300 aaPredicted RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 FRMD1Q8N878 549 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 OR2A12Q8NGT7 310 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 LILRB1Q8NHL6 650 aaPredicted RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 FAM3DQ96BQ1 224 aa13.93□□□□□ -0.18
CASC3-201ENST00000264645 TSPAN10Q9H1Z9 355 aaPredicted RBP13.93□□□□□ -0.18
CASC3-201ENST00000264645 SLC22A23A1A5C7 686 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 BDH1Q02338 343 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 COMTD1Q86VU5 262 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 PPP1R1CQ8WVI7 109 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 KCMF1Q9P0J7 381 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 PURGQ9UJV8 347 aaKnown RBP13.92□□□□□ -0.18
CASC3-201ENST00000264645 GLI3P10071 1580 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 EDDM13A0A1B0GTR0 161 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 FFAR1O14842 300 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 SUSD5O60279 629 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 SOD2P04179 222 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 ZNF888P0CJ79 500 aaPredicted RBP13.92□□□□□ -0.18
CASC3-201ENST00000264645 GP1BBP13224 206 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 NDUFS1P28331 727 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 LSM11P83369 360 aaKnown RBP eCLIP13.92□□□□□ -0.184e-9■■■□□ 19.1
CASC3-201ENST00000264645 CDK5Q00535 292 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 PLA1AQ53H76 456 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 EID2BQ96D98 161 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 OR52A5Q9H2C5 316 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 PRSS16Q9NQE7 514 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 EFCAB7A8K855 629 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 GABRA1P14867 456 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 NME1P15531 152 aaKnown RBP13.92□□□□□ -0.18
CASC3-201ENST00000264645 TYRP1P17643 537 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 P2RX1P51575 399 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 RNF212Q495C1 297 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 SOHLH1Q5JUK2 328 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 LIPNQ5VXI9 398 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 FAM111BQ6SJ93 734 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 COX15Q7KZN9 410 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 TRAPPC6BQ86SZ2 158 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 FNDC9Q8TBE3 224 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 CPEB1Q9BZB8 566 aaKnown RBP13.92□□□□□ -0.18
CASC3-201ENST00000264645 CMC2Q9NRP2 79 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 GPR160Q9UJ42 338 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 ETV7Q9Y603 341 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 ZNF850A8MQ14 1090 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 HYAL3O43820 417 aaPredicted RBP13.92□□□□□ -0.18
CASC3-201ENST00000264645 GLP1RP43220 463 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 HERV-K104P61576 105 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 CDK5R1Q15078 307 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 SLC16A9Q7RTY1 509 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 NRSN1Q8IZ57 195 aa13.92□□□□□ -0.18
CASC3-201ENST00000264645 METTL27Q8N6F8 245 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms