RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CD247P20963 164 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 PAX7P23759 505 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 ROR2Q01974 943 aaKnown RBP14.05□□□□□ -0.16
USE1-201ENST00000263897 SF3A3Q12874 501 aaKnown RBP eCLIP14.05□□□□□ -0.16
USE1-201ENST00000263897 TNK1Q13470 666 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 NPTX1Q15818 432 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 CLEC12BQ2HXU8 276 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 RABL3Q5HYI8 236 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 COQ5Q5HYK3 327 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 HMBOX1Q6NT76 420 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 KLHL24Q6TFL4 600 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 CCDC80Q76M96 950 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 MAGEE2Q8TD90 523 aaPredicted RBP14.05□□□□□ -0.16
USE1-201ENST00000263897 LRRC58Q96CX6 371 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 ALKBH3Q96Q83 286 aaPredicted RBP14.05□□□□□ -0.16
USE1-201ENST00000263897 FKRPQ9H9S5 495 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 CBLN4Q9NTU7 201 aa14.05□□□□□ -0.16
USE1-201ENST00000263897 FN1P02751 2386 aaKnown RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 HIVEP2P31629 2446 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 LOC100653049A0A140TA62 436 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 TRAF3IP2O43734 574 aaPredicted RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 NDUFS7O75251 213 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 KRT34O76011 436 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 HPRP00739 348 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 IGHV4-39P01824 125 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 NQO1P15559 274 aaKnown RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 FABP6P51161 128 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 IL1RL1Q01638 556 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 GUCY1A3Q02108 690 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 PMS2P3Q13401 168 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 KRTAP21-3Q3LHN1 58 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 MMEL1Q495T6 779 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 ENTPD8Q5MY95 495 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 ANKRD16Q6P6B7 361 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 NHLRC1Q6VVB1 395 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 B3GLCTQ6Y288 498 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 CALHM3Q86XJ0 350 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 RBM45Q8IUH3 476 aaKnown RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 UEVLDQ8IX04 471 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 FBXL14Q8N1E6 418 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 SCAIQ8N9R8 606 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 OR8J3Q8NGG0 315 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 OR4D11Q8NGI4 311 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 SLC26A7Q8TE54 656 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 TAMM41Q96BW9 452 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 MOGAT1Q96PD6 335 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 ZNF317Q96PQ6 595 aaPredicted RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 OR2M2Q96R28 347 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 ECSITQ9BQ95 431 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 ASPNQ9BXN1 380 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 GPR35Q9HC97 309 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 MRPL39Q9NYK5 338 aaKnown RBP14.04□□□□□ -0.16
USE1-201ENST00000263897 ATP23Q9Y6H3 246 aa14.04□□□□□ -0.16
USE1-201ENST00000263897 ARPC4-TTLL3A0A0A6YYG9 625 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 CPSF4LA6NMK7 179 aaKnown RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 BBIP1A8MTZ0 92 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 FXYD1O00168 92 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 MRASO14807 208 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 CHP2O43745 196 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 LYPD3O95274 346 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 THY1P04216 161 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 HLA-DOBP13765 273 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 ACVR1BP36896 505 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 CRYBA2P53672 197 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 SH3BGRP55822 239 aaPredicted RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 UBE2NP61088 152 aaKnown RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 ARF1P84077 181 aaKnown RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 MAPRE2Q15555 327 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 C11orf71Q6IPW1 123 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 ZNF544Q6NX49 715 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 TMEM123Q8N131 208 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 MUC15Q8N387 334 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 GPR137CQ8N3F9 429 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 C10orf53Q8N6V4 93 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 PIK3C3Q8NEB9 887 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 VANGL1Q8TAA9 524 aaPredicted RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 ADAMTS16Q8TE57 1224 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 RASSF5Q8WWW0 418 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 NELFAQ9H3P2 528 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 CCDC134Q9H6E4 229 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 BARX1Q9HBU1 254 aaPredicted RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 GDF2Q9UK05 429 aaPredicted RBP14.03□□□□□ -0.16
USE1-201ENST00000263897 NOX1Q9Y5S8 564 aa14.03□□□□□ -0.16
USE1-201ENST00000263897 A0A096LPE4 126 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 IGHV1-18A0A0C4DH31 117 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 A0A1W2PPZ6 126 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 TRAPPC13A5PLN9 417 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 LRRN3E7EW58 273 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 PLPP3O14495 311 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 AKAP8O43823 692 aaKnown RBP14.02□□□□□ -0.17
USE1-201ENST00000263897 MT-ATP6P00846 226 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 APOBEC3AP31941 199 aaPredicted RBP14.02□□□□□ -0.17
USE1-201ENST00000263897 VEZF1Q14119 521 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 CEACAM16Q2WEN9 425 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 HSP90B2PQ58FF3 399 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 REP15Q6BDI9 236 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 WDR88Q6ZMY6 472 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 DNM1P46Q6ZS02 220 aa14.02□□□□□ -0.17
USE1-201ENST00000263897 PXKQ7Z7A4 578 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms