RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PRDM9Q9NQV7 894 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 RXFP3Q9NSD7 469 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 NTMQ9P121 344 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 SLC17A4Q9Y2C5 497 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 HCRTR1O43613 425 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 APOC3P02656 99 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 GTF2F2P13984 249 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 HPGDP15428 266 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 CD53P19397 219 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 SQSTM1Q13501 440 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ENPP2Q13822 863 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 PRICKLE4Q2TBC4 344 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 LIPNQ5VXI9 398 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 LRRC69Q6ZNQ3 347 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OR51D1Q8NGF3 324 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OR6M1Q8NGM8 313 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 OR5AK2Q8NH90 309 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 RBM18Q96H35 190 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 LMF1Q96S06 567 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 KIR3DX1Q9H7L2 352 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 ZMAT3Q9HA38 289 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 C14orf105Q9NVL8 296 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 DNAJB12Q9NXW2 375 aaKnown RBP11.34□□□□□ -0.59
CHMP3-201ENST00000263856 CHRNA9Q9UGM1 479 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 FOXJ3Q9UPW0 622 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 HEBP2Q9Y5Z4 205 aa11.34□□□□□ -0.59
CHMP3-201ENST00000263856 PLATP00750 562 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 TAGLNQ01995 201 aaKnown RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 LTBQ06643 244 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 BEX5Q5H9J7 111 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF776Q68DI1 518 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 FCRL6Q6DN72 434 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 PWWP2BQ6NUJ5 590 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 TMEM81Q6P7N7 255 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 KIAA1324Q6UXG2 1013 aaKnown RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 GLDNQ6ZMI3 551 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 STAC2Q6ZMT1 411 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 GLB1L2Q8IW92 636 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 CSNK1A1LQ8N752 337 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 TRIM2Q9C040 744 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 HRASLS2Q9NWW9 162 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 FBXL2Q9UKC9 423 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 KLHDC2Q9Y2U9 406 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 TICRRQ7Z2Z1 1910 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 TRAV18A0A075B6X5 111 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 A0A0A6YYC8 382 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 I3L1I5 382 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 RBBP9O75884 186 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 PLGP00747 810 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 LPLP06858 475 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 C4BPBP20851 252 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 CTXN1P60606 82 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 SORDQ00796 357 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 TFF2Q03403 129 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 BAIAP2L2Q6UXY1 529 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 POMGNT2Q8NAT1 580 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 ST8SIA4Q92187 359 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 NSMAFQ92636 917 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 PLA2G2FQ9BZM2 168 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 BAIAP2Q9UQB8 552 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 CEP290O15078 2479 aa11.33□□□□□ -0.6
CHMP3-201ENST00000263856 ASCC3Q8N3C0 2202 aaKnown RBP11.33□□□□□ -0.6
CHMP3-201ENST00000263856 A0A1B0GUH1 482 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ELOA3DA6NLF2 546 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ADH1BP00325 375 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 DPP4P27487 766 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 DIO1P49895 249 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ELOA3BQ3SY89 546 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ARSKQ6UWY0 536 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 LSM14AQ8ND56 463 aaKnown RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ELOA3Q8NG57 546 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 OR4C3Q8NH37 302 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 NKD1Q969G9 470 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 TMEM106AQ96A25 262 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 SLC22A18Q96BI1 424 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 RSPH9Q9H1X1 276 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 EXO5Q9H790 373 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ANKRD10Q9NXR5 420 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 LAMP5Q9UJQ1 280 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ENTPD2Q9Y5L3 495 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 PRUNE2Q8WUY3 3088 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 TRAV8-7A0A075B6U6 113 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 SUSD5O60279 629 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 PRAF2O60831 178 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 CBX7O95931 251 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 NAT1P18440 290 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
CHMP3-201ENST00000263856 GRK6P43250 576 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 LSSP48449 732 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 PSG6Q00889 435 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 FAM74A1Q5RGS3 127 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 ULK3Q6PHR2 472 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 SLC35D2Q76EJ3 337 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 OR6V1Q8N148 313 aa11.32□□□□□ -0.6
CHMP3-201ENST00000263856 NPEPL1Q8NDH3 523 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms