RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 BRI3BPQ8WY22 251 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ZDHHC18Q9NUE0 388 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF281Q9Y2X9 895 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 OR6C76A6NM76 312 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 HPNP05981 417 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CD300LGQ6UXG3 332 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ADIPOR2Q86V24 386 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 IRF2BP1Q8IU81 584 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 LMNTD1Q8N9Z9 388 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 GOT1L1Q8NHS2 421 aaPredicted RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FAM183AA6NL82 134 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ADAM10O14672 748 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 LGI1O95970 557 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ARSAP15289 507 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 SLC24A4Q8NFF2 622 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 AMBRA1Q9C0C7 1298 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 PCM1Q15154 2024 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 OR5K3A6NET4 321 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FAM72CH0Y354 149 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 H7C1C5 153 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 LCN6P62502 163 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FAM72AQ5TYM5 149 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FAM72DQ6L9T8 149 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FCRLAQ7L513 359 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FAM72BQ86X60 149 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ENDOVQ8N8Q3 282 aaKnown RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 FNDC8Q8TC99 324 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 IKZF5Q9H5V7 419 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 PRSS38A1L453 326 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CDK2AP1O14519 115 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 PTBP3O95758 552 aaKnown RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 IGHEP01854 428 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 OR13C7P0DN81 318 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 SOHLH1Q5JUK2 328 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 BTNL8Q6UX41 500 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 WDR5BQ86VZ2 330 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CHST14Q8NCH0 376 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 TRUB1Q8WWH5 349 aaKnown RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 CHST11Q9NPF2 352 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 Q9Y3F1 56 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 SIGLEC6O43699 453 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 SUOXP51687 545 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 RAB6CQ53S08 254 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 PLAG1Q6DJT9 500 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 LACC1Q8IV20 430 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 BARHL1Q9BZE3 327 aa10.59□□□□□ -0.71
PTPN4-201ENST00000263708 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
PTPN4-201ENST00000263708 ATRNO75882 1429 aa10.58□□□□□ -0.71
PTPN4-201ENST00000263708 METTL15A6NJ78 407 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ADAM12O43184 909 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 IRF4Q15306 451 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 SIGLECL1Q8N7X8 197 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 FRMD1Q8N878 549 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 POFUT1Q9H488 388 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 MED20Q9H944 212 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 PPP1R3CQ9UQK1 317 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 OR5G3P0C626 314 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ACKR3P25106 362 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 SELENOWP63302 87 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ALKAL2Q6UX46 152 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 RFPL4BQ6ZWI9 263 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 MEPCEQ7L2J0 689 aaKnown RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 CPEB2Q7Z5Q1 589 aaKnown RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ACOT4Q8N9L9 421 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 SLC45A3Q96JT2 553 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 KNTC1P50748 2209 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 PMS2P1A4D2B8 440 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ACSM1Q08AH1 577 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 DPPA2Q7Z7J5 298 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 NECAP2Q9NVZ3 263 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 MARCH4Q9P2E8 410 aaPredicted RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 DNMT3BQ9UBC3 853 aaKnown RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 FBXL2Q9UKC9 423 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 C7P10643 843 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 TCN2P20062 427 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 MYF6P23409 242 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 MYOM1P52179 1685 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 CASP7P55210 303 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 SRPXP78539 464 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 MAT1AQ00266 395 aaKnown RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 LTB4RQ15722 352 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ELAVL4P26378 380 aaKnown RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 RBMS2Q15434 407 aaKnown RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 PROX2Q3B8N5 592 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 L3MBTL4Q8NA19 623 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 DUSP19Q8WTR2 217 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 CTRCQ99895 268 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF251Q9BRH9 671 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 CENPOQ9BU64 300 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 UBQLN4Q9NRR5 601 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 WRAP73Q9P2S5 460 aaPredicted RBP10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ZNF840PA6NDX5 716 aa10.58□□□□□ -0.72
PTPN4-201ENST00000263708 ARPC3O15145 178 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms