RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 SEMA4CQ9C0C4 833 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SLC6A20Q9NP91 592 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ZFP57Q9NU63 452 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 DIMT1Q9UNQ2 313 aaKnown RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 NAV1Q8NEY1 1877 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 A0A0J9YY10 115 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 AP1G1O43747 822 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 GABRA2P47869 451 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 GDF7Q7Z4P5 450 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ZFAND1Q8TCF1 268 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SGPP1Q9BX95 441 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 DNAJB11Q9UBS4 358 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 PPT2Q9UMR5 302 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 A6NCN8 305 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TO15178 435 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 EDIL3O43854 480 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 SUSD5O60279 629 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 CPT2P23786 658 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 BLVRBP30043 206 aaPredicted RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 RAD52P43351 418 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 GLYATL3Q5SZD4 288 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 KDM4DQ6B0I6 523 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 Q6ZTK2 550 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 CREB3L2Q70SY1 520 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TCEAL8Q8IYN2 117 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ST8SIA4Q92187 359 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 GCDHQ92947 438 aaPredicted RBP11.18□□□□□ -0.62
SMG6-201ENST00000263073 FGGYQ96C11 551 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TPPP3Q9BW30 176 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 CHST8Q9H2A9 424 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 TNFRSF12AQ9NP84 129 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 EMC7Q9NPA0 242 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
SMG6-201ENST00000263073 ANKRD30BLA7E2S9 258 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 MT-CO2P00403 227 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 TACR3P29371 465 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 HLA-FP30511 346 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 KCNIP4Q6PIL6 250 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 MBOAT2Q6ZWT7 520 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 SGK3Q96BR1 496 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 OR11A1Q9GZK7 315 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 SIDT1Q9NXL6 827 aaKnown RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 NXT1Q9UKK6 140 aaKnown RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 PIAS3Q9Y6X2 628 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 EIF3FO00303 357 aaPredicted RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 GPX5O75715 221 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 ATG12O94817 140 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 SLC2A1P11166 492 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PTAFRP25105 342 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 MTNR1BP49286 362 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 MTCP1P56278 107 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 RAB31Q13636 194 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 OR10Z1Q8NGY1 313 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 TANKQ92844 425 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 GMLQ99445 158 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 INPP5EQ9NRR6 644 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PDE4DIPQ5VU43 2346 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 NUP188Q5SRE5 1749 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PHF1O43189 567 aaPredicted RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 SRMP19623 302 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PRLHRP49683 370 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PRAMEF20Q5VT98 475 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 HACD4Q5VWC8 232 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 H3F3CQ6NXT2 135 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 RLN3Q8WXF3 142 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PIGTQ969N2 578 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 ORAI1Q96D31 301 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 ZNF578Q96N58 590 aaPredicted RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 BANF2Q9H503 90 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 MRPS28Q9Y2Q9 187 aaKnown RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 MMP11P24347 488 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
SMG6-201ENST00000263073 RAB33AQ14088 237 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 CLEC12BQ2HXU8 276 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 PLXDC1Q8IUK5 500 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 CLDN22Q8N7P3 220 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 RNF141Q8WVD5 230 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
SMG6-201ENST00000263073 RGPD2P0DJD1 1756 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 CLN5O75503 358 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 UBL3O95164 117 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SLC6A8P48029 635 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ISL1P61371 349 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 PDZK1IP1Q13113 114 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ATPAF1Q5TC12 328 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 TMPRSS7Q7RTY8 843 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 BTLAQ7Z6A9 289 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 SLC46A2Q9BY10 475 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 FAM212BQ9NTI7 297 aaPredicted RBP11.16□□□□□ -0.62
SMG6-201ENST00000263073 PRSS38A1L453 326 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 ALX3O95076 343 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 AKR1C3P42330 323 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 OR2B8PP59922 312 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 OXA1LQ15070 435 aa11.16□□□□□ -0.62
SMG6-201ENST00000263073 CNN3Q15417 329 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms