RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 AIPO00170 330 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 B3GALNT1O75752 331 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 IGLV3-19P01714 112 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 CD53P19397 219 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 NFYAP23511 347 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 SLC6A6P31641 620 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 FLI1Q01543 452 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 RPTNQ6XPR3 784 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 Q6ZS52 159 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 Q6ZTK2 550 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 RFLNBQ8N5W9 214 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 SMRP1Q8NCR6 262 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 CLRN3Q8NCR9 226 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 UQCC2Q9BRT2 126 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 IFT22Q9H7X7 185 aa20.66■□□□□ 0.9
MCF2L-201ENST00000261963 KLF2Q9Y5W3 355 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-201ENST00000261963 TDRD6O60522 2096 aaKnown RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 TCRBV16S1A1N1A0A5B0 115 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 J3QLW9 94 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 RNH1P13489 461 aaKnown RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 ZNF19P17023 458 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 IGLV3-21P80748 117 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 SLC3A1Q07837 685 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 STX4Q12846 297 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 KLF9Q13886 244 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 NDUFAF6Q330K2 333 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 HSD17B13Q7Z5P4 300 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 SCARB1Q8WTV0 552 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 RBM18Q96H35 190 aaKnown RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 PGLYRP3Q96LB9 341 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 LRRC61Q9BV99 259 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 GPR174Q9BXC1 333 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 HPF1Q9NWY4 346 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 OR6C65A6NJZ3 312 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 GNB5O14775 395 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 CTNSO60931 367 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 MAZP56270 477 aaKnown RBP20.65■□□□□ 0.9
MCF2L-201ENST00000261963 BTG2P78543 158 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 NNATQ16517 81 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 METTL11BQ5VVY1 283 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 ARHGAP11AQ6P4F7 1023 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 ALKAL2Q6UX46 152 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 OR5J2Q8NH18 312 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 SLC2A12Q8TD20 617 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 MGAT4CQ9UBM8 478 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 CHRNA9Q9UGM1 479 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 SERTAD3Q9UJW9 196 aa20.65■□□□□ 0.9
MCF2L-201ENST00000261963 A0A0G2JK05 382 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 SC5DO75845 299 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 SLC25A35Q3KQZ1 300 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 OR51Q1Q8NH59 317 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 ABHD4Q8TB40 342 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 LCORQ96JN0 433 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-201ENST00000261963 ORAI3Q9BRQ5 295 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 NPDC1Q9NQX5 325 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-201ENST00000261963 FBXL2Q9UKC9 423 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 FLVCR2Q9UPI3 526 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 USP34Q70CQ2 3546 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 ZNF98A6NK75 572 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 C2CD4DB7Z1M9 353 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 CT45A8P0DMV1 189 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 CT45A9P0DMV2 189 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 GPR3P46089 330 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 CT45A2Q5DJT8 189 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 SFRP5Q5T4F7 317 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 ULK3Q6PHR2 472 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 C17orf107Q6ZR85 190 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 C7orf57Q8NEG2 295 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 KLHL1Q9NR64 748 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 LRIT1Q9P2V4 623 aa20.64■□□□□ 0.89
MCF2L-201ENST00000261963 MCRIP1C9JLW8 97 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 PLATP00750 562 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 DMKNQ6E0U4 476 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 CEACAM19Q7Z692 300 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 PXKQ7Z7A4 578 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 ARL14Q8N4G2 192 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 OR52E2Q8NGJ4 325 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 PIPOXQ9P0Z9 390 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 DNASE2O00115 360 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 GIPP09681 153 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 HOXB1P14653 301 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 HIST1H1CP16403 213 aaKnown RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 ACVR1BP36896 505 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 HCCSP53701 268 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 B3GNTL1Q67FW5 361 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 SFRP4Q6FHJ7 346 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-201ENST00000261963 ZNF550Q7Z398 422 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 FAM71CQ8NEG0 241 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 SDR9C7Q8NEX9 313 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 OR11G2Q8NGC1 345 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 OR4K13Q8NH42 304 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 HAVCR2Q8TDQ0 301 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 MAP3K3Q99759 626 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 PRTFDC1Q9NRG1 225 aa20.63■□□□□ 0.89
MCF2L-201ENST00000261963 RP2O75695 350 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 IFNGP01579 166 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 CALCRP30988 508 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 TAS2R43P59537 309 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 HLXQ14774 488 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms