RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CRYZL1O95825 349 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 THY1P04216 161 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GSTT2P0CG29 244 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GSTT2BP0CG30 244 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 PPIAL4GP0DN37 164 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 MLNP12872 115 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 UQCRC2P22695 453 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 TUBG1P23258 451 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 IFNA8P32881 189 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 CD80P33681 288 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 NAA10P41227 235 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 CRATP43155 626 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 HTR5AP47898 357 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 CASP4P49662 377 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 BCAP31P51572 246 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 IST1P53990 364 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 CSNK1G2P78368 415 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GLO1Q04760 184 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 BST2Q10589 180 aaKnown RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 RCAN2Q14206 197 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 RAB35Q15286 201 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 KYAT1Q16773 422 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 SLC22A6Q4U2R8 563 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 RNASEKQ6P5S7 137 aaKnown RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 WASH2PQ6VEQ5 465 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 STAC2Q6ZMT1 411 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 FRA10AC1Q70Z53 315 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 FAM122BQ7Z309 247 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 NATD1Q8N6N6 113 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 PQLC3Q8N755 202 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 FAM83FQ8NEG4 500 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OR5AU1Q8NGC0 362 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OR8J2Q8NGG1 315 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 UBA3Q8TBC4 463 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 CCNL2Q96S94 520 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OPN3Q9H1Y3 402 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 OR51B5Q9H339 312 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GAL3ST2Q9H3Q3 398 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 METTL8Q9H825 291 aaKnown RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GPN2Q9H9Y4 310 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 ELOVL3Q9HB03 270 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 MCCC2Q9HCC0 563 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 CSNK1G1Q9HCP0 422 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 TIGARQ9NQ88 270 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 EXOSC3Q9NQT5 275 aaKnown RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 TUBG2Q9NRH3 451 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 SLC7A10Q9NS82 523 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 C20orf96Q9NUD7 363 aaPredicted RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 NKIRAS1Q9NYS0 192 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GALPQ9UBC7 116 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 PRODH2Q9UF12 536 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 EIF3LQ9Y262 564 aaKnown RBP3.32□□□□□ -1.88
CCDC54-201ENST00000261058 ERGIC3Q9Y282 383 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 RHBDD3Q9Y3P4 386 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 WDR45Q9Y484 360 aa3.32□□□□□ -1.88
CCDC54-201ENST00000261058 GRIN2DO15399 1336 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ATP10DQ9P241 1426 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 FUOMA2VDF0 154 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 BET1O15155 118 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 KDELR3O43731 214 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 CALUO43852 315 aaPredicted RBP3.31□□□□□ -1.88
CCDC54-201ENST00000261058 STX11O75558 287 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TM7SF2O76062 418 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ANP32DO95626 131 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 RAB3DO95716 219 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TPSB2P20231 275 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 HOXA9P31269 272 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 CXCL6P80162 114 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 PLOD1Q02809 727 aaPredicted RBP3.31□□□□□ -1.88
CCDC54-201ENST00000261058 PJVKQ0ZLH3 352 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TFDP1Q14186 410 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 GPR176Q14439 515 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TPSAB1Q15661 275 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 VAMP3Q15836 100 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 SYPL1Q16563 259 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 PAGE2BQ5JRK9 111 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 WSCD1Q658N2 575 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 C1orf94Q6P1W5 598 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TTC33Q6PID6 262 aaPredicted RBP3.31□□□□□ -1.88
CCDC54-201ENST00000261058 BTNL3Q6UXE8 466 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 RTL4Q6ZR62 310 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ERICH1Q86X53 443 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 GPR65Q8IYL9 337 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 SNX31Q8N9S9 440 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 OR7G2Q8NG99 324 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 RFESDQ8TAC1 157 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ZNF596Q8TC21 504 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TFB1MQ8WVM0 346 aaKnown RBP3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TM4SF19Q96DZ7 209 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 HPDLQ96IR7 371 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 OLFM3Q96PB7 478 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 TGM7Q96PF1 710 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ZNF317Q96PQ6 595 aaPredicted RBP3.31□□□□□ -1.88
CCDC54-201ENST00000261058 CENPKQ9BS16 269 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 CHID1Q9BWS9 393 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 LPAR2Q9HBW0 351 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 VCX3AQ9NNX9 186 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 PNO1Q9NRX1 252 aaKnown RBP3.31□□□□□ -1.88
CCDC54-201ENST00000261058 PRR34Q9NV39 138 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms