RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ESPNLQ6ZVH7 1005 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 SYT13Q7L8C5 426 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 HMGN2P46Q86SG4 172 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 RANBP3LQ86VV4 465 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 PARGQ86W56 976 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 TMEM17Q86X19 198 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC22A18ASQ8N1D0 253 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 PXT1Q8NFP0 134 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC37A2Q8TED4 501 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 COL26A1Q96A83 441 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 KLHDC7BQ96G42 594 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 HS6ST2Q96MM7 605 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 SEMA6CQ9H3T2 930 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 ADGRL4Q9HBW9 690 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 EXOSC3Q9NQT5 275 aaKnown RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 WSB2Q9NYS7 404 aaPredicted RBP9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 SLC6A5Q9Y345 797 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 KCNE3Q9Y6H6 103 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 CHD7Q9P2D1 2997 aa9.9□□□□□ -0.82
CHRNA1-201ENST00000261007 A0A0B4J203 849 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 ZC3H12DA2A288 527 aaKnown RBP9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 POM121CA8CG34 1229 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF879B4DU55 563 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 ARPC5O15511 151 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 FRS3O43559 492 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 RCBTB2O95199 551 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 NTN1O95631 604 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 RAB40ALP0C0E4 278 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 PRG2P13727 222 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 RPA2P15927 270 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 PDX1P52945 283 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 OR12D2P58182 307 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 HHEXQ03014 270 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 SMAD4Q13485 552 aaKnown RBP9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 FZD2Q14332 565 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 GPR68Q15743 365 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 FHL5Q5TD97 284 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 FAM111BQ6SJ93 734 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 C17orf107Q6ZR85 190 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 SYS1Q8N2H4 156 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF619Q8N2I2 560 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 DNAAF1Q8NEP3 725 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 FANK1Q8TC84 345 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 TMEM255BQ8WV15 326 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 RAB40AQ8WXH6 277 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 SMPDL3BQ92485 455 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 CDS1Q92903 461 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 SMIM19Q96E16 107 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 LRRC46Q96FV0 321 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 CD180Q99467 661 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF350Q9GZX5 532 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 QRSL1Q9H0R6 528 aaKnown RBP9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 PCED1AQ9H1Q7 454 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 SAV1Q9H4B6 383 aaPredicted RBP9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 MED20Q9H944 212 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 UCK1Q9HA47 277 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 IL21RQ9HBE5 538 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 MRPL15Q9P015 296 aaKnown RBP9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 F5P12259 2224 aa9.9□□□□□ -0.83
CHRNA1-201ENST00000261007 H7C2Y5 167 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 ACOT7O00154 380 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 FMO6PO60774 539 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 PRAMEF2O60811 474 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 CDC123O75794 336 aaPredicted RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 FCER2P06734 321 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 UBBP0CG47 229 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 UBCP0CG48 685 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SRFP11831 508 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 RPS4Y1P22090 263 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SLC2A5P22732 501 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 PYCR1P32322 319 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 RPS27AP62979 156 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 UBA52P62987 128 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 FOXK2Q01167 660 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 GAS6Q14393 721 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 CDK5R1Q15078 307 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 TCEA2Q15560 299 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 LINC00303Q3SY05 128 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SLC36A1Q7Z2H8 476 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 IZUMO1Q8IYV9 350 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SLC16A11Q8NCK7 471 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 OR5J2Q8NH18 312 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 NSMAFQ92636 917 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 PIGKQ92643 395 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 S100A16Q96FQ6 103 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 DMRTA2Q96SC8 542 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SDF2Q99470 211 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 ORAI3Q9BRQ5 295 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 HCAR1Q9BXC0 346 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 NKX6-2Q9C056 277 aaPredicted RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 C14orf105Q9NVL8 296 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SIDT1Q9NXL6 827 aaKnown RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 TAS2R10Q9NYW0 307 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF223Q9UK11 482 aaPredicted RBP9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 CYP8B1Q9UNU6 501 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 PLCL2Q9UPR0 1127 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 SLC35A3Q9Y2D2 325 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 PCDHGA5Q9Y5G8 931 aa9.89□□□□□ -0.83
CHRNA1-201ENST00000261007 MKI67P46013 3256 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms