RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SEM1Q6ZVN7 128 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 PRRG4Q9BZD6 226 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 ING1Q9UK53 422 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 RASD1Q9Y272 281 aa14.09□□□□□ -0.15
CCDC90B-201ENST00000260054 POLEQ07864 2286 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 CD8B2A6NJW9 211 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 VAMP5O95183 116 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 PLGP00747 810 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 POU1F1P28069 291 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 PTGER4P35408 488 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 RPL4P36578 427 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 CRISP1P54107 249 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 RAD23AP54725 363 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 POU3F1Q03052 451 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 RASGEF1BQ0VAM2 473 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 MRPL49Q13405 166 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 C1orf185Q5T7R7 199 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 RPL13AP3Q6NVV1 102 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 NHLRC1Q6VVB1 395 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 PXKQ7Z7A4 578 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC43A2Q8N370 569 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 OXGR1Q96P68 337 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 GPX7Q96SL4 187 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 MBOAT4Q96T53 435 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 SF3B5Q9BWJ5 86 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 GABARAPL3Q9BY60 117 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 TP63Q9H3D4 680 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 TOR3AQ9H497 397 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 RIBC2Q9H4K1 309 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 CALHM2Q9HA72 323 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 INIPQ9NRY2 104 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 TBC1D23Q9NUY8 699 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 SMPD3Q9NY59 655 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 SH3BGRL2Q9UJC5 107 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 RALYQ9UKM9 306 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
CCDC90B-201ENST00000260054 LOC102725191A0A1B0GVB3 256 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 TRAF3IP2O43734 574 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 CTXN1P60606 82 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ESRRGP62508 458 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 NPRL3Q12980 569 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 POU4F3Q15319 338 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 SF3B4Q15427 424 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 C9orf106Q8NAJ2 232 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ANKK1Q8NFD2 765 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 OR9K2Q8NGE7 335 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 OR52L1Q8NGH7 329 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 TEX47Q8TBZ9 253 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 WNT2BQ93097 391 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 KATNB1Q9BVA0 655 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 TSSK6Q9BXA6 273 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 VCXQ9H320 206 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 VCX3BQ9H321 246 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 RNF122Q9H9V4 155 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 NRIP3Q9NQ35 241 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ADAM18Q9Y3Q7 739 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 CHD6Q8TD26 2715 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 MBD3L4A6NDZ8 208 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 MBD3L3A6NE82 208 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 MBD3L5A6NJ08 208 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 BHLHE40O14503 412 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 PPP1R3DO95685 299 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 FCGR2AP12318 317 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF43P17038 809 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC6A6P31641 620 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 VHLP40337 213 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 SLC16A1P53985 500 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 AQP4P55087 323 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ERVK-25P63136 954 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 PTGES3Q15185 160 aaKnown RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 TAF11Q15544 211 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 TMEM236Q5W0B7 351 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 P4HA3Q7Z4N8 544 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 UEVLDQ8IX04 471 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 IQCF1Q8N6M8 205 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 OR4Q3Q8NH05 313 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 MBD3L2Q8NHZ7 208 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ZNF775Q96BV0 537 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 RDH12Q96NR8 316 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 IFT27Q9BW83 186 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 KLHL9Q9P2J3 617 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 ENOPH1Q9UHY7 261 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 CLEC4AQ9UMR7 237 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 NOX1Q9Y5S8 564 aa14.07□□□□□ -0.16
CCDC90B-201ENST00000260054 IGKV3D-15A0A087WSY6 115 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 TOXO94900 526 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 CD14P08571 375 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 HOXD4P09016 255 aaPredicted RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 IFNGR1P15260 489 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 GIPRP48546 466 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 C1DQ13901 141 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 GINS1Q14691 196 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 PDK3Q15120 406 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 RNPS1Q15287 305 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 IGFBP7Q16270 282 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 ACKR1Q16570 336 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 IZUMO2Q6UXV1 221 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 B3GNT6Q6ZMB0 384 aa14.06□□□□□ -0.16
CCDC90B-201ENST00000260054 DPY19L2P2Q6ZN68 376 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms