RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 GPR35Q9HC97 309 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 CA10Q9NS85 328 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 KLHL14Q9P2G3 628 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 EVPLLA8MZ36 301 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 F12P00748 615 aaPredicted RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 HLA-DOBP13765 273 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 NQO1P15559 274 aaKnown RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC25A16P16260 332 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 SERPINF1P36955 418 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 LOXL1Q08397 574 aaPredicted RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 CEACAM16Q2WEN9 425 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 PHYHD1Q5SRE7 291 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 C6orf52Q5T4I8 152 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 CARD17Q5XLA6 110 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 DLEU7Q6UYE1 221 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 HIPK1Q86Z02 1210 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 ARMC8Q8IUR7 673 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 ANKS4BQ8N8V4 417 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 SMYD1Q8NB12 490 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 MAGEE2Q8TD90 523 aaPredicted RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC47A1Q96FL8 570 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 SORCS2Q96PQ0 1159 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 OR2M2Q96R28 347 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 CPPED1Q9BRF8 314 aaPredicted RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 EMC6Q9BV81 110 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 KATNB1Q9BVA0 655 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 TMEM27Q9HBJ8 222 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 CRNNQ9UBG3 495 aaPredicted RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 TESQ9UGI8 421 aaKnown RBP16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC13A4Q9UKG4 626 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 GMEB1Q9Y692 573 aa16.53■□□□□ 0.24
TM6SF1-201ENST00000258909 ZNF503-AS2A6NEH8 195 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 LRRN3E7EW58 273 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 MS4A18H0YCH9 400 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 RPL36A-HNRNPH2H7BZ11 118 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 M0R3G1 203 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 TRAF3IP2O43734 574 aaPredicted RBP16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 FZD7O75084 574 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 ATP4BP51164 291 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 SH3BGRP55822 239 aaPredicted RBP16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 SNRPD2P62316 118 aaKnown RBP16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 MS4A18Q3C1V0 323 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 FAM91A1Q658Y4 838 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 C5orf46Q6UWT4 87 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 ZNF607Q96SK3 696 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 VRK1Q99986 396 aaPredicted RBP16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 SELENONQ9NZV5 590 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 SVEP1Q4LDE5 3571 aa16.52■□□□□ 0.23
TM6SF1-201ENST00000258909 STAB1Q9NY15 2570 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 A0A087WUJ7 227 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 A0A0B4J2E0 115 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 A0A1B0GX12 115 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 PRORSD1PA6NEY8 169 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 SERPINB7O75635 380 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 IGLV1-44P01699 117 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 OR4A8P0C604 315 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 CAPZA2P47755 286 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 IDH3GP51553 393 aaPredicted RBP16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 CDH12P55289 794 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 NPRL3Q12980 569 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 SELPLGQ14242 412 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 ADIPOQQ15848 244 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 CARTPTQ16568 116 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 RUNDC3AQ59EK9 446 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 CXXC5Q7LFL8 322 aaKnown RBP16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 SLC46A3Q7Z3Q1 461 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 NET1Q7Z628 596 aaPredicted RBP16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 WDFY1Q8IWB7 410 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 UEVLDQ8IX04 471 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 TMEM123Q8N131 208 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 C10orf53Q8N6V4 93 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 HIPK4Q8NE63 616 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 PIK3C3Q8NEB9 887 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 TXNDC15Q96J42 360 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 MOGAT1Q96PD6 335 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 ZNF317Q96PQ6 595 aaPredicted RBP16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 INTS9Q9NV88 658 aaKnown RBP16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 MED29Q9NX70 200 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 CORO2BQ9UQ03 480 aa16.51■□□□□ 0.23
TM6SF1-201ENST00000258909 MALRD1Q5VYJ5 2156 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 M0R3H8 397 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 MFN2O95140 757 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 IGKV3-15P01624 115 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 BGLAPP02818 100 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 OPN1SWP03999 348 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 MTPNP58546 118 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 VLDLRP98155 873 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 POU3F1Q03052 451 aaPredicted RBP16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 HGFACQ04756 655 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 DHDDSQ86SQ9 333 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 PTOV1Q86YD1 416 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 SLC41A3Q96GZ6 507 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 ANGPT4Q9Y264 503 aa16.5■□□□□ 0.23
TM6SF1-201ENST00000258909 LOC102725191A0A1B0GVB3 256 aa16.49■□□□□ 0.23
TM6SF1-201ENST00000258909 SERPINI2O75830 405 aa16.49■□□□□ 0.23
TM6SF1-201ENST00000258909 HOXB1P14653 301 aaPredicted RBP16.49■□□□□ 0.23
TM6SF1-201ENST00000258909 CBR1P16152 277 aa16.49■□□□□ 0.23
TM6SF1-201ENST00000258909 USF1P22415 310 aaPredicted RBP16.49■□□□□ 0.23
TM6SF1-201ENST00000258909 PMS2P3Q13401 168 aa16.49■□□□□ 0.23
TM6SF1-201ENST00000258909 GGTLC2Q14390 218 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms