RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ADAM8P78325 824 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 LTBQ06643 244 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 KRR1Q13601 381 aaKnown RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 MLC1Q15049 377 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 C3orf38Q5JPI3 329 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CEP78Q5JTW2 689 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 FAM219AQ8IW50 185 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 RFT1Q96AA3 541 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 WDR77Q9BQA1 342 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 NOX4Q9NPH5 578 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CRNNQ9UBG3 495 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 DENND4AQ7Z401 1863 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CCDC182A6NF36 153 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 PRR32B1ATL7 298 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 TEX46H3BTG2 121 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 BHLHE40O14503 412 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 IDH3BO43837 385 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 WNT11O96014 354 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 MST1P26927 711 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 STARP49675 285 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 LGALS3BPQ08380 585 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 MLLT11Q13015 90 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 TMEM176BQ3YBM2 270 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 EEF1A1P5Q5VTE0 462 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 MEDAGQ5VYS4 303 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 LINC00696Q6ZRV3 163 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF550Q7Z398 422 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 JAGN1Q8N5M9 183 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 TRMT10AQ8TBZ6 339 aaKnown RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 FBLIM1Q8WUP2 373 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CYYR1Q96J86 154 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CNN2Q99439 309 aaKnown RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 SLC22A11Q9NSA0 550 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 CNOT2Q9NZN8 540 aaKnown RBP8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF222Q9UK12 451 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ACAD8Q9UKU7 415 aa8.27□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF670-ZNF695F2Z2N8 137 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 MEN1O00255 615 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 MT-ND4P03905 459 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PATE4P0C8F1 98 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 SPI1P17947 270 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 MAGEA8P43361 318 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 EBPQ15125 230 aaKnown RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PRAMEF8Q5VWM4 474 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PRAMEF7Q5VXH5 474 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 TMEM225Q6GV28 225 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PLET1Q6UQ28 207 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 TMEM105Q8N8V8 129 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 NEURL2Q9BR09 285 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 AUNIPQ9H7T9 357 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF160Q9HCG1 818 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 EMC7Q9NPA0 242 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PLSCR3Q9NRY6 295 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PLCXD1Q9NUJ7 323 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 TAS2R10Q9NYW0 307 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 VSX1Q9NZR4 365 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 TESQ9UGI8 421 aaKnown RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 FBXL3Q9UKT7 428 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 CDV3Q9UKY7 258 aaKnown RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 COA3Q9Y2R0 106 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 CENPEQ02224 2701 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF701M0R085 212 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 SULT1C4O75897 302 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 EIF4EP06730 217 aaKnown RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PRKAR1AP10644 381 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 IFNGR1P15260 489 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 HTR1FP30939 366 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 SLC6A9P48067 706 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 NRG3P56975 720 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 SPOCK1Q08629 439 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 ACKR1Q16570 336 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 LIPNQ5VXI9 398 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 AKAP14Q86UN6 197 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 OR6V1Q8N148 313 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 OR4M1Q8NGD0 313 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 WWTR1Q9GZV5 400 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 MIXL1Q9H2W2 232 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PRDM9Q9NQV7 894 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 LANCL2Q9NS86 450 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 CGGBP1Q9UFW8 167 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-201ENST00000258607 FBXL2Q9UKC9 423 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 NPFFR2Q9Y5X5 522 aa8.26□□□□□ -1.09
CKAP2-201ENST00000258607 RAMP1O60894 148 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 AHSA1O95433 338 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF12P17014 697 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 TSFMP43897 325 aaKnown RBP8.25□□□□□ -1.09
CKAP2-201ENST00000258607 HSD17B7P56937 341 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 TLE3Q04726 772 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF79Q15937 498 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 TBRG1Q3YBR2 411 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-201ENST00000258607 BCL2L15Q5TBC7 163 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 DHRS4L2Q6PKH6 230 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 DHRS13Q6UX07 377 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF517Q6ZMY9 492 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-201ENST00000258607 TMEM91Q6ZNR0 172 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 NDUFAF7Q7L592 441 aa8.25□□□□□ -1.09
CKAP2-201ENST00000258607 YRDCQ86U90 279 aaKnown RBP8.25□□□□□ -1.09
CKAP2-201ENST00000258607 ZNF615Q8N8J6 731 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms