RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 XYLT2Q9H1B5 865 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SEC61A2Q9H9S3 476 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 PLEK2Q9NYT0 353 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MTCH1Q9NZJ7 389 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 A0A1B0GUH1 482 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MEIS3P2A8K0S8 358 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 HBE1P02100 147 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC6A2P23975 617 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 GEMP55040 296 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 KRTDAPP60985 99 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SMAD3P84022 425 aaKnown RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 NRG1Q02297 640 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 KIAA0895LQ68EN5 471 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SIAH3Q8IW03 269 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TCTN2Q96GX1 697 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TBX15Q96SF7 602 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 NEU1Q99519 415 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 YAE1D1Q9NRH1 226 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 DNAJC27Q9NZQ0 273 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC2A6Q9UGQ3 507 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TSPAN11A1L157 253 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 C7orf77A4D0Y5 90 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 OR52A4PA6NMU1 304 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 A8MVM7 634 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 NME4O00746 187 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 GLCEO94923 617 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 LIPFP07098 398 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 AKAIN1P0CW23 69 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 ACHEP22303 614 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CXCR1P25024 350 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 RAG2P55895 527 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 ISXQ2M1V0 245 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 DCAF10Q5QP82 559 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF66Q6ZN08 573 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CDC20BQ86Y33 519 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CPXM2Q8N436 756 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 OR5AR1Q8NGP9 310 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM186Q96B77 213 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TEAD3Q99594 435 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 FTHL17Q9BXU8 183 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC17A6Q9P2U8 582 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 RBPJLQ9UBG7 517 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 DNAJB11Q9UBS4 358 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 FZD10Q9ULW2 581 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 A6NDN8 102 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SNRPGP15A8MWD9 76 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MCRIP1C9JLW8 97 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 AIFM1O95831 613 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SFTPBP07988 381 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 HOXA5P20719 270 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 POLR2IP36954 125 aaKnown RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 RBMXP38159 391 aaKnown RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TCTAP57738 103 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MSS51Q4VC12 460 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 FBLN7Q53RD9 439 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TTC32Q5I0X7 151 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CLEC6AQ6EIG7 209 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 GID4Q8IVV7 300 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC26A10Q8NG04 563 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 RXFP2Q8WXD0 754 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SIGLEC10Q96LC7 697 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 FGFBP2Q9BYJ0 223 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 DOK5Q9P104 306 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CKLFQ9UBR5 152 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 UQCR10Q9UDW1 63 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TRAPPC2LQ9UL33 140 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CASTOR2A6NHX0 329 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ADAMTS3O15072 1205 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 DOK2O60496 412 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CHRM4P08173 479 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TNFSF9P41273 254 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 HYAL2Q12891 473 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 CHIT1Q13231 466 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR14L1PQ8NHC6 308 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SH3RF2Q8TEC5 729 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TSEN15Q8WW01 171 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TMED6Q8WW62 240 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ISOC2Q96AB3 205 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM74Q96NL1 305 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 WDFY2Q96P53 400 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF385AQ96PM9 386 aaKnown RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ELOVL4Q9GZR5 314 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 FBXO34Q9NWN3 711 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 NAGKQ9UJ70 344 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 KCNG2Q9UJ96 466 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 RCE1Q9Y256 329 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 HYKKA2RU49 373 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 TARM1B6A8C7 271 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SYT5O00445 386 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SEPT4O43236 478 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 ICOSLGO75144 302 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 S1PR4O95977 384 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 SOX3P41225 446 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 OR4D2P58180 307 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 INPP5JQ15735 1006 aaPredicted RBP6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 LYRM7Q5U5X0 104 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 XAF1Q6GPH4 301 aa6.26□□□□□ -1.41
PDGFRA-201ENST00000257290 APOOLQ6UXV4 268 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms