RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
PRPF38A-201ENST00000257181 MCRIP1C9JLW8 97 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 MRPL3P09001 348 aaKnown RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 GABRA2P47869 451 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 PODNL1Q6PEZ8 512 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM205Q6UW68 189 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 DOK3Q7L591 496 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 WDR20Q8TBZ3 569 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 ZFAND1Q8TCF1 268 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 GTF2H4Q92759 462 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 RNF6Q9Y252 685 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 MYH10P35580 1976 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A1W2PQD3 144 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 M0R1B8 84 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 DOK2O60496 412 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF17P17021 662 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TUBG1P23258 451 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF133P52736 654 aaPredicted RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 HSF1Q00613 529 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 OR8G1Q15617 311 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 OR52H1Q8NGJ2 320 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 SAP25Q8TEE9 199 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 SF3B5Q9BWJ5 86 aaKnown RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TUBG2Q9NRH3 451 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 FBP2O00757 339 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 FGF17O60258 216 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 SLC2A2P11168 524 aaPredicted RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 IL2RGP31785 369 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 BSGP35613 385 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 MEF2DQ14814 521 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF836Q6ZNA1 936 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TPK1Q9H3S4 243 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 CXorf56Q9H5V9 222 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TAS2R16Q9NYV7 291 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A1W2PQ09 198 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 C5orf51A6NDU8 294 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 BMP2P12643 396 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 B3GNTL1Q67FW5 361 aaPredicted RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 THAP6Q8TBB0 222 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TBC1D15Q8TC07 691 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 PATE1Q8WXA2 126 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 SLC34A2O95436 690 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TFPTP0C1Z6 253 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 PRKXP51817 358 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 C1QTNF12Q5T7M4 302 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TCTN3Q6NUS6 607 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF420Q8TAQ5 688 aaPredicted RBP12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM30AQ9NV96 361 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 SLC23A2Q9UGH3 650 aa12.31□□□□□ -0.44
PRPF38A-201ENST00000257181 TRIM64BA6NI03 449 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 FOLR1P15328 257 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 PEX2P28328 305 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SRP14P37108 136 aaKnown RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 LSM3P62310 102 aaKnown RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 PROX2Q3B8N5 592 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 OR4F15Q8NGB8 312 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 NAT14Q8WUY8 206 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 BARHL1Q9BZE3 327 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 VN1R1Q9GZP7 353 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF286AQ9HBT8 521 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 FAM96BQ9Y3D0 163 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 BORCS7-ASMTA0A0B4J1R7 106 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CLDN25C9JDP6 229 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 PAPLNO95428 1278 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 IFNA5P01569 189 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 FCARP24071 287 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 ADARB1P78563 741 aaKnown RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 C4orf46Q504U0 113 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 ZNF573Q86YE8 665 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 OR56B1Q8NGI3 324 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 NEIL3Q8TAT5 605 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SCGB1C1Q8TD33 95 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 NKX3-1Q99801 234 aaPredicted RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 A0A1W2PR48 441 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 GPR39O43194 453 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 IGHV4-34P06331 123 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CXCR4P61073 352 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 RAC1P63000 192 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SPHARQ15513 63 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 TMEM69Q5SWH9 247 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 VASNQ6EMK4 673 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CYHR1Q6ZMK1 362 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 GDPD3Q7L5L3 318 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CORO2AQ92828 525 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 RSPRY1Q96DX4 576 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 FAM71F1Q96KD3 344 aaPredicted RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 FEVQ99581 238 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 UBE2J1Q9Y385 318 aaPredicted RBP12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 CTXN2P0C2S0 81 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 TAS2R46P59540 309 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 GPR50Q13585 617 aa12.3□□□□□ -0.44
PRPF38A-201ENST00000257181 SYPL1Q16563 259 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms