RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 A0A0G2JPF8 293 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 LOC390937A0A1W2PQ73 354 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 ZNF503-AS2A6NEH8 195 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 TRPC5OSA6NMA1 111 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 HNRNPCL2B2RXH8 293 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 HNRNPCL3B7ZW38 293 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 NR5A2O00482 541 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 EREGO14944 169 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 TRAF3IP2O43734 574 aaPredicted RBP8.94□□□□□ -0.98
VPS50-201ENST00000251739 HNRNPCL1O60812 293 aaKnown RBP8.94□□□□□ -0.98
VPS50-201ENST00000251739 SLC22A3O75751 556 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 CRYAAP02489 173 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 IGFBP1P08833 259 aaPredicted RBP8.94□□□□□ -0.98
VPS50-201ENST00000251739 HNRNPCL4P0DMR1 293 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 GIFP27352 417 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 GSK3AP49840 483 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 COPZ1P61923 177 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 HGFACQ04756 655 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 GGTLC2Q14390 218 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 LARS2Q15031 903 aaKnown RBP8.94□□□□□ -0.98
VPS50-201ENST00000251739 TMEM225Q6GV28 225 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 TMEM123Q8N131 208 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 NUP37Q8NFH4 326 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 OR9I1Q8NGQ6 314 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 TAPBPLQ9BX59 468 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 ZNF442Q9H7R0 627 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 C12orf10Q9HB07 376 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 THAP1Q9NVV9 213 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 THUMPD1Q9NXG2 353 aaKnown RBP8.94□□□□□ -0.98
VPS50-201ENST00000251739 SEC14L4Q9UDX3 406 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS50-201ENST00000251739 RAB21Q9UL25 225 aa8.94□□□□□ -0.98
VPS50-201ENST00000251739 V9GYY5 206 aaPredicted RBP8.94□□□□□ -0.98
VPS50-201ENST00000251739 IGKV1D-42A0A075B6H8 117 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 LOC102725191A0A1B0GVB3 256 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 TMEM120BA0PK00 339 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 AHSA1O95433 338 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 CELA3BP08861 270 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 OR4A8P0C604 315 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 ZNF23P17027 643 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 CRATP43155 626 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 MRPL19P49406 292 aaKnown RBP8.93□□□□□ -0.98
VPS50-201ENST00000251739 SLC18A1P54219 525 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 TUBA1BP68363 451 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 TUBA4AP68366 448 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 ARF1P84077 181 aaKnown RBP8.93□□□□□ -0.98
VPS50-201ENST00000251739 ROR2Q01974 943 aaKnown RBP8.93□□□□□ -0.98
VPS50-201ENST00000251739 SLC9B1Q4ZJI4 515 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 CEP85LQ5SZL2 805 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 FAM120AOSQ5T036 256 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 HHATQ5VTY9 493 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 FAM166AQ6J272 317 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 NIPAL3Q6P499 406 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 NHLRC1Q6VVB1 395 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 TUBA1AQ71U36 451 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 SLC46A3Q7Z3Q1 461 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 COMTD1Q86VU5 262 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 MSRB3Q8IXL7 192 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 ADPRHL1Q8NDY3 354 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 OR4F15Q8NGB8 312 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 GTF2H4Q92759 462 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 KTI12Q96EK9 354 aaPredicted RBP8.93□□□□□ -0.98
VPS50-201ENST00000251739 FOXN4Q96NZ1 517 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 OR52B2Q96RD2 323 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 SOX7Q9BT81 388 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 PARD6BQ9BYG5 372 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 PAIP1Q9H074 479 aaKnown RBP8.93□□□□□ -0.98
VPS50-201ENST00000251739 KCNK9Q9NPC2 374 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 A4GALTQ9NPC4 353 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 KCNS2Q9ULS6 477 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 IFT52Q9Y366 437 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 WNK2Q9Y3S1 2297 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
VPS50-201ENST00000251739 A0A096LPE4 126 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 IGHV2OR16-5A0A0B4J2B6 119 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 LOC100289279A0A1B0GTE1 492 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 A0A1W2PPZ6 126 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 TMEM129A0AVI4 362 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 SLCO1B7G3V0H7 640 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 KRT33AO76009 404 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 TACSTD2P09758 323 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 APEHP13798 732 aaKnown RBP8.92□□□□□ -0.98
VPS50-201ENST00000251739 CBR1P16152 277 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 SRD5A1P18405 259 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 NCF2P19878 526 aaPredicted RBP8.92□□□□□ -0.98
VPS50-201ENST00000251739 HTR2AP28223 471 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 IDH3GP51553 393 aaPredicted RBP8.92□□□□□ -0.98
VPS50-201ENST00000251739 CLDN17P56750 224 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 UBE2NP61088 152 aaKnown RBP8.92□□□□□ -0.98
VPS50-201ENST00000251739 HOXC5Q00444 222 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 POU3F1Q03052 451 aaPredicted RBP8.92□□□□□ -0.98
VPS50-201ENST00000251739 FADDQ13158 208 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 RGNQ15493 299 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 C5orf46Q6UWT4 87 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 IL17RELQ6ZVW7 336 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 KDM8Q8N371 416 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 LSMEM1Q8N8F7 131 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 BBS10Q8TAM1 723 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 MAL2Q969L2 176 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 TAAR8Q969N4 342 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms