RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ARSKQ6UWY0 536 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 C12orf40Q86WS4 652 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 LINC00346Q8IVM7 164 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 KIAA1958Q8N8K9 716 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZBTB44Q8NCP5 570 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FCRL1Q96LA6 429 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 WASH6PQ9NQA3 447 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PCDHB16Q9NRJ7 776 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TBC1D29Q9UFV1 150 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CBLCQ9ULV8 474 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PIAS3Q9Y6X2 628 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PVALBP20472 110 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PXDC1Q5TGL8 231 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 GSG1LQ6UXU4 331 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 NLRC3Q7RTR2 1065 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PXT1Q8NFP0 134 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 B3GALT1Q9Y5Z6 326 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 COL6A6A6NMZ7 2263 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM82A0PJX8 343 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 OR5K4A6NMS3 321 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CCSO14618 274 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CBX5P45973 191 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 THSD4Q6ZMP0 1018 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ARHGDIGQ99819 225 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SLC22A13Q9Y226 551 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZSWIM8A7E2V4 1837 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRSS38A1L453 326 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 KCNAB1Q14722 419 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CDK5R1Q15078 307 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SPIN3Q5JUX0 258 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 WBP2NLQ6ICG8 309 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 MAMDC2Q7Z304 686 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 OR5H2Q8NGV7 314 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FBLIM1Q8WUP2 373 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 NUDT22Q9BRQ3 303 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FBXO34Q9NWN3 711 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 H0Y8X5 98 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRAMEF2O60811 474 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRAF2O60831 178 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 HIST1H1CP16403 213 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CDK2P24941 298 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 GALK2Q01415 458 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PHF19Q5T6S3 580 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 EEF1A1P5Q5VTE0 462 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TCTE3Q8IZS6 198 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ANKRD53Q8N9V6 530 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 MED30Q96HR3 178 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CNTNAP3BQ96NU0 1288 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PDE7BQ9NP56 450 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 GDE1Q9NZC3 331 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 C19orf53Q9UNZ5 99 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 EMC9Q9Y3B6 208 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 NPFFR2Q9Y5X5 522 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SCGNO76038 276 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 LALBAP00709 142 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ATP1B1P05026 303 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 HEXBP07686 556 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 NME2P22392 152 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PXNP49023 591 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CSNK2A1P68400 391 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ARHGAP11BQ3KRB8 267 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF628Q5EBL2 1059 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 LSRQ86X29 649 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SIRT6Q8N6T7 355 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF454Q8N9F8 522 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CSNK2A3Q8NEV1 391 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 RBPMSQ93062 196 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 DERL3Q96Q80 235 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 MYADMQ96S97 322 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 DCLRE1CQ96SD1 692 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 KCNN3Q9UGI6 736 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ARRDC5A6NEK1 342 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 F8W036 122 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TP53P04637 393 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF41P51814 821 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ARHGDIBP52566 201 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 BLOC1S1P78537 153 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TLE3Q04726 772 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CBFBQ13951 182 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FXNQ16595 210 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ST3GAL2Q16842 350 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM215Q68D42 235 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SLC6A19Q695T7 634 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 BPIFB2Q8N4F0 458 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 MFSD8Q8NHS3 518 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 DEFB126Q9BYW3 111 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CMC2Q9NRP2 79 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 VSX1Q9NZR4 365 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CIB4A0PJX0 185 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 POM121BA6NF01 834 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 AGAP14A8MT82 685 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 P2RY10O00398 339 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 GPR171O14626 319 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 MSL3P1P0C860 447 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM225BP0DP42 221 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 SPI1P17947 270 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 ETV6P41212 452 aa4.24□□□□□ -1.73
VPS13C-201ENST00000249837 PCBP4P57723 403 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms