RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 RNF220Q5VTB9 566 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 C1orf140Q5VVS0 124 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 PRAMEF8Q5VWM4 474 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 PRAMEF7Q5VXH5 474 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 NANOGP8Q6NSW7 305 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 CREB3L2Q70SY1 520 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 OR1K1Q8NGR3 316 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 NFKBIDQ8NI38 313 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 BBS10Q8TAM1 723 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC38A2Q96QD8 506 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 KATNB1Q9BVA0 655 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 SPATA9Q9BWV2 254 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 TMEM38AQ9H6F2 299 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 KAT8Q9H7Z6 458 aaKnown RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 NANOGQ9H9S0 305 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 MOV10Q9HCE1 1003 aaKnown RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 RASD1Q9Y272 281 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 IFT52Q9Y366 437 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 CADP27708 2225 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 IGHV1-18A0A0C4DH31 117 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 A0A0G2JPF8 293 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 HNRNPCL2B2RXH8 293 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 HNRNPCL3B7ZW38 293 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 C5orf58C9J3I9 102 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 HNRNPCL1O60812 293 aaKnown RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 DCTN3O75935 186 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 AHSA1O95433 338 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 HNRNPCL4P0DMR1 293 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 GTF2E2P29084 291 aaKnown RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 GZMKP49863 264 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 CDK6Q00534 326 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 ADRM1Q16186 407 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 CYP51A1Q16850 503 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 SWI5Q1ZZU3 235 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 GKAP1Q5VSY0 366 aaPredicted RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 NIPAL3Q6P499 406 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 NET1Q7Z628 596 aaPredicted RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 PTOV1Q86YD1 416 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 PHC2Q8IXK0 858 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 OR8J3Q8NGG0 315 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 STK35Q8TDR2 534 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 NANOS1Q8WY41 292 aaKnown RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 PIMREGQ9BSJ6 248 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 BCL2L10Q9HD36 194 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 MYOZ1Q9NP98 299 aaPredicted RBP11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 GID8Q9NWU2 228 aa11.26□□□□□ -0.61
APOBEC3A-201ENST00000249116 ARPC4-TTLL3A0A0A6YYG9 625 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 LMX1BO60663 402 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 LGI1O95970 557 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 IGHV4-31P0DP07 118 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 ZNF16P17020 682 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 PRDX6P30041 224 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SERPINF1P36955 418 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SELENOPP49908 381 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 P2RY4P51582 365 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SH3BGRP55822 239 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SCARB2Q14108 478 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 MST1LQ2TV78 715 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 RABL3Q5HYI8 236 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 ZNF311Q5JNZ3 666 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 REEP3Q6NUK4 255 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC46A3Q7Z3Q1 461 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SERPINA11Q86U17 422 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 LSRQ86X29 649 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 CLIP4Q8N3C7 705 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 OR10A6Q8NH74 314 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 MFSD8Q8NHS3 518 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 MAGEE2Q8TD90 523 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 BCL2L2Q92843 193 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 C3orf49Q96BT1 292 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC25A36Q96CQ1 311 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 CMTM5Q96DZ9 223 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SORCS2Q96PQ0 1159 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 ALKBH3Q96Q83 286 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 LRRC37BQ96QE4 947 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 SH3GL1Q99961 368 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 VRK1Q99986 396 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 CA10Q9NS85 328 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 RPS6KB2Q9UBS0 482 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 FBXO9Q9UK97 447 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 ANGPT4Q9Y264 503 aa11.25□□□□□ -0.61
APOBEC3A-201ENST00000249116 VSTM5A8MXK1 200 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 TMEM229AB2RXF0 380 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 B9A039 149 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 AIM2O14862 343 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 NPIPB7O75200 414 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 PDE5AO76074 875 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 LY6HO94772 140 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 PRG2P13727 222 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 ETS2P15036 469 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 ZNF43P17038 809 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 SLC6A2P23975 617 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 NUDT2P50583 147 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 GZMMP51124 257 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 RBBP4Q09028 425 aa11.24□□□□□ -0.61
APOBEC3A-201ENST00000249116 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms