RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MEPEQ9NQ76 525 aaPredicted RBP15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 SIRT4Q9Y6E7 314 aaPredicted RBP15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 BMP7P18075 431 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 HTR3AP46098 478 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 PYDC2Q56P42 97 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 LYPD8Q6UX82 237 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 TMEM91Q6ZNR0 172 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 TMPRSS11FQ6ZWK6 438 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 BEST3Q8N1M1 668 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 TMEM156Q8N614 296 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 ACBD7Q8N6N7 88 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 GRHL3Q8TE85 626 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 PTP4A1Q93096 173 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 COQ7Q99807 217 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 ATF6BQ99941 703 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 FN3KQ9H479 309 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 ASB6Q9NWX5 421 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 STMN3Q9NZ72 180 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 POLHQ9Y253 713 aa15.38■□□□□ 0.05
CDKN1A-201ENST00000244741 PPM1BO75688 479 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 CCNKO75909 580 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 SOX30O94993 753 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 RCBTB2O95199 551 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 HPGDP15428 266 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 NR4A2P43354 598 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 FOXK2Q01167 660 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 ASAH1Q13510 395 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 KLHL12Q53G59 568 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 NEIL3Q8TAT5 605 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 SLC22A8Q8TCC7 542 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 KISS1RQ969F8 398 aaPredicted RBP15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 IFT27Q9BW83 186 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 MRTO4Q9UKD2 239 aaKnown RBP15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 SIGLEC7Q9Y286 467 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 MED31Q9Y3C7 131 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 GRIP1Q9Y3R0 1128 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 EML6Q6ZMW3 1958 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 PTPRQQ9UMZ3 2332 aa15.37■□□□□ 0.05
CDKN1A-201ENST00000244741 TRAV27A0A087WT01 109 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SEC14L5O43304 696 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SCO2O43819 266 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 HPGDSO60760 199 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 ADAM11O75078 769 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 GAAP10253 952 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SAGP10523 405 aaPredicted RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PAICSP22234 425 aaKnown RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SSR4P51571 173 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 ATP12AP54707 1039 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PSMD4P55036 377 aaKnown RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 MARCH3Q86UD3 253 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 CDK20Q8IZL9 346 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SLC37A3Q8NCC5 494 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 OR51A7Q8NH64 312 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 ZNF559Q9BR84 538 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 ALG8Q9BVK2 526 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 C11orf54Q9H0W9 315 aaPredicted RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 MMP28Q9H239 520 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 TMEM27Q9HBJ8 222 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 GALNT9Q9HCQ5 603 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 BABAM2Q9NXR7 383 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PLA2G3Q9NZ20 509 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 NPAP1Q9NZP6 1156 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PIEZO2Q9H5I5 2752 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 TPRP12270 2363 aaKnown RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 G3V3Y1 287 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PTP4A3O75365 173 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 APEX1P27695 318 aaKnown RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PPP3R1P63098 170 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 CD226Q15762 336 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 ZNF362Q5T0B9 420 aaPredicted RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 OR5M10Q6IEU7 315 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 H3F3CQ6NXT2 135 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 PMM1Q92871 262 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SPACA9Q96E40 222 aaPredicted RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 SOSTQ9BQB4 213 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 RNF32Q9H0A6 362 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 CMC2Q9NRP2 79 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 UBQLN4Q9NRR5 601 aa15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 RBMX2Q9Y388 322 aaKnown RBP15.36■□□□□ 0.05
CDKN1A-201ENST00000244741 A0A1B0GWA3 101 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 CCDC182A6NF36 153 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 NPIPB9F8W1W9 429 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 RRP8O43159 456 aaKnown RBP15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 RNF13O43567 381 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 PNLIPRP2P54317 469 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 RRADP55042 308 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 CTBP2P56545 445 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 TLE3Q04726 772 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 PRAMEF20Q5VT98 475 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 RSBN1Q5VWQ0 802 aaPredicted RBP15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 ZNF544Q6NX49 715 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 ZNF613Q6PF04 617 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 CNIH2Q6PI25 160 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 MDGA2Q7Z553 956 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 OR6F1Q8NGZ6 308 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 SLC22A4Q9H015 551 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 POLE3Q9NRF9 147 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 MALT1Q9UDY8 824 aa15.35■□□□□ 0.05
CDKN1A-201ENST00000244741 TMEM5Q9Y2B1 443 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms