RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ATF6BQ99941 703 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 OR11A1Q9GZK7 315 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 NXT1Q9UKK6 140 aaKnown RBP16.73■□□□□ 0.27
HOXC11-201ENST00000243082 MOKQ9UQ07 419 aa16.73■□□□□ 0.27
HOXC11-201ENST00000243082 H7C1C5 153 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 PRKCAP17252 672 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 HTR3AP46098 478 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 MTNR1BP49286 362 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 LCN6P62502 163 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 NR2C2APQ86WQ0 139 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 POC5Q8NA72 575 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 SNX33Q8WV41 574 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 TMEM234Q8WY98 164 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 GHSRQ92847 366 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 MARCH7Q9H992 704 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 SRA1Q9HD15 236 aaKnown RBP16.72■□□□□ 0.27
HOXC11-201ENST00000243082 MED11Q9P086 117 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 HRH3Q9Y5N1 445 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 LOC102723996A0A087X1L8 192 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 C11orf98E9PRG8 122 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 OR2J2O76002 312 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 DXOO77932 396 aaKnown RBP16.72■□□□□ 0.27
HOXC11-201ENST00000243082 KLK3P07288 261 aaPredicted RBP16.72■□□□□ 0.27
HOXC11-201ENST00000243082 SP9P0CG40 484 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 GBX2P52951 348 aaPredicted RBP16.72■□□□□ 0.27
HOXC11-201ENST00000243082 SIRPAP78324 504 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 GLYR1Q49A26 553 aaPredicted RBP16.72■□□□□ 0.27
HOXC11-201ENST00000243082 FAM27D1Q5T7N8 215 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 DDI2Q5TDH0 399 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 FAM198BQ6UWH4 519 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 DBX2Q6ZNG2 339 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 PXKQ7Z7A4 578 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 OR6V1Q8N148 313 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 ST8SIA1Q92185 356 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 PPP1R14BQ96C90 147 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 SP140LQ9H930 580 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 C14orf119Q9NWQ9 140 aa16.72■□□□□ 0.27
HOXC11-201ENST00000243082 GPN3Q9UHW5 284 aaPredicted RBP16.72■□□□□ 0.27
HOXC11-201ENST00000243082 A0A0C4DFX4 3053 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
HOXC11-201ENST00000243082 UMODP07911 640 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 ACP1P24666 158 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 SHC1P29353 583 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 GRPRP30550 384 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 PTGDSP41222 190 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 SUMO3P55854 103 aaPredicted RBP16.71■□□□□ 0.27
HOXC11-201ENST00000243082 DLX5P56178 289 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 HSF2Q03933 536 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 CDK5R1Q15078 307 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 CEACAM19Q7Z692 300 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 ELP5Q8TE02 316 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 THAP4Q8WY91 577 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 MR1Q95460 341 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 SRRQ9GZT4 340 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 GNG8Q9UK08 70 aa16.71■□□□□ 0.27
HOXC11-201ENST00000243082 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 TEX51A0A1B0GUA7 166 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 PRR32B1ATL7 298 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 DKK1O94907 266 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 GP1BAP07359 652 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 MPLP40238 635 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 CDC20Q12834 499 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF684Q5T5D7 378 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ARSKQ6UWY0 536 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 SLC16A9Q7RTY1 509 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 TIGD4Q8IY51 512 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 MS4A15Q8N5U1 240 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 SMIM19Q96E16 107 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 DIRAS2Q96HU8 199 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ULBP3Q9BZM4 244 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ARRDC1-AS1Q9H2J1 176 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 INIPQ9NRY2 104 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ACOXLQ9NUZ1 547 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 COMMD3Q9UBI1 195 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 FTCDNL1E5RQL4 147 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 KLF7O75840 302 aaPredicted RBP16.7■□□□□ 0.26
HOXC11-201ENST00000243082 AHSA1O95433 338 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 RENP00797 406 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 FBXO45P0C2W1 286 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 TMED10P49755 219 aaKnown RBP16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF528Q3MIS6 628 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ACSM3Q53FZ2 586 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 EEF1A1P5Q5VTE0 462 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 RPL22L1Q6P5R6 122 aaKnown RBP16.7■□□□□ 0.26
HOXC11-201ENST00000243082 C5orf46Q6UWT4 87 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF517Q6ZMY9 492 aaPredicted RBP16.7■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF554Q86TJ5 538 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 OR10G3Q8NGC4 313 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 OR13C5Q8NGS8 318 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 OR2T4Q8NH00 348 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 RELTQ969Z4 430 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 KLRF1Q9NZS2 232 aa16.7■□□□□ 0.26
HOXC11-201ENST00000243082 A0A1W2PRG6 482 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 PLPP3O14495 311 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ARHGEF9O43307 516 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 OR2T1O43869 369 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 AHCYP23526 432 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 GDI2P50395 445 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms