RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 HTR4Q13639 388 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SF3A2Q15428 464 aaKnown RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CARTPTQ16568 116 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ZFP69Q49AA0 526 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CCDC92Q53HC0 331 aaPredicted RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 C9orf50Q5SZB4 431 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CCNJQ5T5M9 372 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TIGD3Q6B0B8 471 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 HBMQ6B0K9 141 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ARHGAP11AQ6P4F7 1023 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 PLET1Q6UQ28 207 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 WDR88Q6ZMY6 472 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM91Q6ZNR0 172 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 RD3Q7Z3Z2 195 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TMPRSS9Q7Z410 1059 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ABI3BPQ7Z7G0 1075 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 KLBQ86Z14 1044 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 OR4N5Q8IXE1 308 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 OR4N4Q8N0Y3 316 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CA13Q8N1Q1 262 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 Q8N402 240 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 LSMEM1Q8N8F7 131 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ZFP41Q8N8Y5 198 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 Q8NA96 180 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SIMC1Q8NDZ2 872 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 OR51G2Q8NGK0 314 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 OR10G6Q8NH81 332 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CCL4L1Q8NHW4 92 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ENKURQ8TC29 256 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 ADAMTS18Q8TE60 1221 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 OIT3Q8WWZ8 545 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 SLC7A6Q92536 515 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 EXTL1Q92935 676 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CCNL2Q96S94 520 aaPredicted RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TIMP4Q99727 224 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TTYH2Q9BSA4 534 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM43Q9BTV4 400 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 HDHD5Q9BXW7 423 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 S1PR5Q9H228 398 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 C8orf33Q9H7E9 229 aaPredicted RBP7.17□□□□□ -1.26
CXCR4-201ENST00000241393 TBC1D17Q9HA65 648 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 COMMD3Q9UBI1 195 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 N6AMT1Q9Y5N5 214 aa7.17□□□□□ -1.26
CXCR4-201ENST00000241393 CHD7Q9P2D1 2997 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ANKRD61A6NGH8 418 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TMEM200CA6NKL6 621 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 CENPXA8MT69 81 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 LINC01565O15544 149 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 NARSO43776 548 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 HPGDSO60760 199 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ELANEP08246 267 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SBK2P0C263 348 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PEPDP12955 493 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SLC2A5P22732 501 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ACSL1P33121 698 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 GABRA3P34903 492 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 NUDT1P36639 197 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TPMTP51580 245 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 CCR5P51681 352 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 NXPH1P58417 271 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 IFITM2Q01629 132 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNHIT3Q15649 155 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TAB1Q15750 504 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF141Q15928 474 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 CD300EQ496F6 205 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ARHGAP40Q5TG30 622 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 KIAA1324Q6UXG2 1013 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PAMR1Q6UXH9 720 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 RTL4Q6ZR62 310 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF550Q7Z398 422 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 DGLUCYQ7Z3D6 616 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 OOSP2Q86WS3 158 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 LRRC28Q86X40 367 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 MS4A15Q8N5U1 240 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SLC37A3Q8NCC5 494 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 OR4C6Q8NH72 309 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PTP4A1Q93096 173 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ANKRD9Q96BM1 317 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF578Q96N58 590 aaPredicted RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TEAD3Q99594 435 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 IFT27Q9BW83 186 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 RERGLQ9H628 205 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 CYSLTR2Q9NS75 346 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 C20orf141Q9NUB4 165 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 HRASLS2Q9NWW9 162 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 KLHL21Q9UJP4 597 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SERTAD3Q9UJW9 196 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 NDRG2Q9UN36 371 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 MRPS2Q9Y399 296 aaKnown RBP7.16□□□□□ -1.26
CXCR4-201ENST00000241393 TICRRQ7Z2Z1 1910 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 A0A1B0GWA3 101 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 OR5K3A6NET4 321 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 ZNF860A6NHJ4 632 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 FAM183AA6NL82 134 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 EFCAB7A8K855 629 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PRAMEF26H0Y7S4 382 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 PEX12O00623 359 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 LDB3O75112 727 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 DNAJB6O75190 326 aa7.16□□□□□ -1.26
CXCR4-201ENST00000241393 SC5DO75845 299 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms