RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SLC3A1Q07837 685 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 EXT1Q16394 746 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 CCDC58Q4VC31 144 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 TP53I3Q53FA7 332 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 OR5M10Q6IEU7 315 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 LYPD8Q6UX82 237 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 ZNF517Q6ZMY9 492 aaPredicted RBP21.05■□□□□ 0.96
MSX2-201ENST00000239243 SLC16A9Q7RTY1 509 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 SNX18Q96RF0 628 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 GALNT9Q9HCQ5 603 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 NCDNQ9UBB6 729 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 MYO15AQ9UKN7 3530 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 OGG1O15527 345 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 DXOO77932 396 aaKnown RBP21.05■□□□□ 0.96
MSX2-201ENST00000239243 CD1AP06126 327 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 E2F1Q01094 437 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 NTRK2Q16620 822 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 STEAP3Q658P3 488 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 TCEAL6Q6IPX3 200 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 RFLNBQ8N5W9 214 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 TCEAL3Q969E4 200 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 SMIM19Q96E16 107 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 PELI1Q96FA3 418 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 PGLYRP3Q96LB9 341 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 METTL7AQ9H8H3 244 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 SP140LQ9H930 580 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 ABCB9Q9NP78 766 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 ST6GALNAC2Q9UJ37 374 aa21.05■□□□□ 0.96
MSX2-201ENST00000239243 CD63P08962 238 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 GRPRP30550 384 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 INSL4Q14641 139 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 ANGPT1Q15389 498 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 RPL22L1Q6P5R6 122 aaKnown RBP21.04■□□□□ 0.96
MSX2-201ENST00000239243 PAMR1Q6UXH9 720 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 ABHD4Q8TB40 342 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 MNTQ99583 582 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 ZNF700Q9H0M5 742 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 MRPL39Q9NYK5 338 aaKnown RBP21.04■□□□□ 0.96
MSX2-201ENST00000239243 IGLV3-32A0A0A0MS00 114 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 IGHV1-45A0A0A0MS14 117 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 DEFA1P59665 94 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 DEFA3P59666 94 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 PPP3R1P63098 170 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 SIRPAP78324 504 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 CDK5R1Q15078 307 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 MZT2AQ6P582 158 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 OR2Y1Q8NGV0 311 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 HAVCR2Q8TDQ0 301 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 SPACA9Q96E40 222 aaPredicted RBP21.04■□□□□ 0.96
MSX2-201ENST00000239243 RASL10BQ96S79 203 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 MED11Q9P086 117 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 GNG8Q9UK08 70 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 WIF1Q9Y5W5 379 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 V9GYH0 126 aa21.04■□□□□ 0.96
MSX2-201ENST00000239243 C2orf72A6NCS6 295 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 C11orf98E9PRG8 122 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 ETV2O00321 342 aaPredicted RBP21.03■□□□□ 0.96
MSX2-201ENST00000239243 ZNF208O43345 1280 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 UMODP07911 640 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 MYL9P24844 172 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 GTF2E2P29084 291 aaKnown RBP21.03■□□□□ 0.96
MSX2-201ENST00000239243 ZNF41P51814 821 aaPredicted RBP21.03■□□□□ 0.96
MSX2-201ENST00000239243 RPL27P61353 136 aaKnown RBP21.03■□□□□ 0.96
MSX2-201ENST00000239243 RPTNQ6XPR3 784 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 KCTD20Q7Z5Y7 419 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 SLC22A16Q86VW1 577 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 TPRA1Q86W33 373 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 GHSRQ92847 366 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 DDIT4LQ96D03 193 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 SRA1Q9HD15 236 aaKnown RBP21.03■□□□□ 0.96
MSX2-201ENST00000239243 ETAA1Q9NY74 926 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 COPS3Q9UNS2 423 aa21.03■□□□□ 0.96
MSX2-201ENST00000239243 ARHGEF9O43307 516 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 KLF7O75840 302 aaPredicted RBP21.02■□□□□ 0.96
MSX2-201ENST00000239243 SC5DO75845 299 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 WISP1O95388 367 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 IGHMP01871 453 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 AHCYP23526 432 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 ACVR1BP36896 505 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 PSMD7P51665 324 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 EEF1A1P5Q5VTE0 462 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 FAM83FQ8NEG4 500 aaPredicted RBP21.02■□□□□ 0.96
MSX2-201ENST00000239243 ACOT12Q8WYK0 555 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 PMEPA1Q969W9 287 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 TSSK2Q96PF2 358 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 TTTY10Q9BZA0 68 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 OR11A1Q9GZK7 315 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 TXNIPQ9H3M7 391 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 PLPP3O14495 311 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 TP53I11O14683 189 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 CENPAP49450 140 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 DCAF12Q5T6F0 453 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 SLC6A19Q695T7 634 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 TEX19Q8NA77 164 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 OR10G3Q8NGC4 313 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 MFSD8Q8NHS3 518 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 M1APQ8TC57 530 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 MRGPRX4Q96LA9 322 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 MIXL1Q9H2W2 232 aa21.02■□□□□ 0.96
MSX2-201ENST00000239243 GRIP1Q9Y3R0 1128 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms