RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CCKBRP32239 447 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 MICBQ29980 383 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 ARHGAP11BQ3KRB8 267 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CTSL3PQ5NE16 218 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 COX20Q5RI15 118 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 ZCCHC10Q8TBK6 192 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CASD1Q96PB1 797 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 GPR87Q9BY21 358 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 PARP12Q9H0J9 701 aaKnown RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 ESRP2Q9H6T0 727 aaKnown RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 MBD1Q9UIS9 605 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 UBE2CO00762 179 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 PEX10O60683 326 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 ARG1P05089 322 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 SULT1A1P50225 295 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 PRICKLE2Q7Z3G6 844 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 COMMD6Q7Z4G1 85 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 OR4K13Q8NH42 304 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CABLES2Q9BTV7 478 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 SLC12A9Q9BXP2 914 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CD84Q9UIB8 345 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 KLK8O60259 260 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 KNG1P01042 644 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CAV2P51636 162 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 HTRA3P83110 453 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 OR5I1Q13606 314 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CYB561A3Q8NBI2 242 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 OR4C16Q8NGL9 310 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 GPR119Q8TDV5 335 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 PTPN18Q99952 460 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 SLC25A19Q9HC21 320 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 TM7SF3Q9NS93 570 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 OR52A4PA6NMU1 304 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 LANCL1O43813 399 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 CX3CR1P49238 355 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 GATMP50440 423 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 ACSM1Q08AH1 577 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF345Q14585 488 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 SURF2Q15527 256 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 TMEM31Q5JXX7 168 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 FAM199XQ6PEV8 388 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 GABRG1Q8N1C3 465 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 SLC25A44Q96H78 314 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 MS4A4EQ96PG1 132 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 DDA1Q9BW61 102 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 GPR174Q9BXC1 333 aa11.93□□□□□ -0.5
VAMP4-201ENST00000236192 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
VAMP4-201ENST00000236192 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 MMP3P08254 477 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 CDK5Q00535 292 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 RASGEF1BQ0VAM2 473 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF563Q8TA94 476 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF596Q8TC21 504 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 GTF3AQ92664 365 aaKnown RBP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SCLYQ96I15 445 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 ASB16Q96NS5 453 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 VAMP8Q9BV40 100 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 UBQLN4Q9NRR5 601 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 CA10Q9NS85 328 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SLC7A7Q9UM01 511 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 A6NIZ1 184 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 METTL15P1P0C7V9 234 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 RAP1BP61224 184 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 PPA1Q15181 289 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 VWA2Q5GFL6 755 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 ATXN7L2Q5T6C5 722 aaPredicted RBP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 CTU1Q7Z7A3 348 aaKnown RBP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 ETFBKMTQ8IXQ9 262 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 RSPRY1Q96DX4 576 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 AQP7O14520 342 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 AK1P00568 194 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SDHBP21912 280 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 HIST1H3AP68431 136 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 PKDCCQ504Y2 493 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 MSRB3Q8IXL7 192 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.5
VAMP4-201ENST00000236192 NRIP2Q9BQI9 281 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SLCO1B1Q9Y6L6 691 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 LRP3O75074 770 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 GPR32O75388 356 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 CCKARP32238 428 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 CST9LP1Q5W188 147 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 LYG2Q86SG7 212 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 OOSP2Q86WS3 158 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 DTD2Q96FN9 168 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SLC35B3Q9H1N7 401 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 SPG21Q9NZD8 308 aa11.92□□□□□ -0.5
VAMP4-201ENST00000236192 IDSP22304 550 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms