RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SCGB2A1O75556 95 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 KLKB1P03952 638 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 ANXA7P20073 488 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 MTCP1P56278 107 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 ZNF169Q14929 603 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 Q499Y3 187 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 CADM3Q8N126 398 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 SELENOIQ9C0D9 397 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 A0A1B0GTW7 788 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 CBR1P16152 277 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 GABRA2P47869 451 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 ETV1P50549 477 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 HCCSP53701 268 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MRPS34P82930 218 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 DBPQ10586 325 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 FAPQ12884 760 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 LRRC26Q2I0M4 334 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MRPL41Q8IXM3 137 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 MRPL43Q8N983 215 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 ZNF511Q8NB15 262 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 FAM213BQ8TBF2 198 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 SAMD10Q9BYL1 202 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 SLC6A17Q9H1V8 727 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 NTN4Q9HB63 628 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEK4-201ENST00000233027 GDE1Q9NZC3 331 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 PLEKHM1Q9Y4G2 1056 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 C17orf113A0A1B0GUU1 675 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 RFXAPO00287 272 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 UBL3O95164 117 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 UTS2O95399 124 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 ALKBH1Q13686 389 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 MKXQ8IYA7 352 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 PXT1Q8NFP0 134 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 TAAR8Q969N4 342 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 ZNF566Q969W8 418 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MAP3K3Q99759 626 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MYO18AQ92614 2054 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 GNB3P16520 340 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 MMP11P24347 488 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 GP2P55259 537 aaKnown RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 FOXB2Q5VYV0 432 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MED25Q71SY5 747 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 CNEP1R1Q8N9A8 125 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 LINC01599Q8WXQ3 324 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 PSMF1Q92530 271 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 SGPP1Q9BX95 441 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 C1orf123Q9NWV4 160 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 NME7Q9Y5B8 376 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 AP1G1O43747 822 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 TUSC2O75896 110 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 OR7C1O76099 320 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 MFGE8Q08431 387 aaPredicted RBP12.38□□□□□ -0.43
NEK4-201ENST00000233027 RTL6Q6ICC9 239 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 MS4A4AQ96JQ5 239 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 SLC22A7Q9Y694 548 aa12.38□□□□□ -0.43
NEK4-201ENST00000233027 G3V3Y1 287 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 AADACL3Q5VUY0 350 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 RHBDD1Q8TEB9 315 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 CAMK2AQ9UQM7 478 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 HS3ST2Q9Y278 367 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 MSTNO14793 375 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 GJA4P35212 333 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 MOKQ9UQ07 419 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 SRMP19623 302 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 IL32P24001 234 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 NUDT1P36639 197 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 BIDP55957 195 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 HTRA3P83110 453 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 ZNF595Q8IYB9 648 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 SECTM1Q8WVN6 248 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 SGK3Q96BR1 496 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 C3orf49Q96BT1 292 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 RBMXL1Q96E39 390 aaKnown RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 SLC23A2Q9UGH3 650 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 TSTD3H0UI37 97 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 PAPLNO95428 1278 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 NSA2O95478 260 aaKnown RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 BLVRBP30043 206 aaPredicted RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 CCDC71Q8IV32 467 aaPredicted RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 SLCO4A1Q96BD0 722 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 FGGYQ96C11 551 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 MYH9P35579 1960 aaKnown RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 SOCS7O14512 581 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 CCSO14618 274 aa12.37□□□□□ -0.43
NEK4-201ENST00000233027 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
NEK4-201ENST00000233027 ZFAND5O76080 213 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms