RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PIP5K1CO60331 668 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 MRPL33O75394 65 aaKnown RBP12.07□□□□□ -0.48
VEGFA-201ENST00000230480 OR5F1O95221 314 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 CH25HO95992 272 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 FUT1P19526 365 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 DNAJA1P31689 397 aaKnown RBP12.07□□□□□ -0.48
VEGFA-201ENST00000230480 MS4A2Q01362 244 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 TMEM225Q6GV28 225 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 C5orf46Q6UWT4 87 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 DEF8Q6ZN54 512 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 MEX3DQ86XN8 651 aaKnown RBP12.07□□□□□ -0.48
VEGFA-201ENST00000230480 DEFB107AQ8IZN7 70 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 PROX1Q92786 737 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 APH1AQ96BI3 265 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 LRRC46Q96FV0 321 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 BOD1Q96IK1 185 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 MPP4Q96JB8 637 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 TAPBPLQ9BX59 468 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 POLDIP3Q9BY77 421 aaKnown RBP12.07□□□□□ -0.48
VEGFA-201ENST00000230480 CLEC4MQ9H2X3 399 aaPredicted RBP12.07□□□□□ -0.48
VEGFA-201ENST00000230480 GORASP2Q9H8Y8 452 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 TAS2R1Q9NYW7 299 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 ADA2Q9NZK5 511 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 RHCGQ9UBD6 479 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 SLC13A4Q9UKG4 626 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 B3GALT5Q9Y2C3 310 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 SLC9A8Q9Y2E8 581 aa12.07□□□□□ -0.48
VEGFA-201ENST00000230480 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-201ENST00000230480 DPRXA6NFQ7 191 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 B2RBV5 119 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 VAMP5O95183 116 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 ZNF26P17031 533 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-201ENST00000230480 TCN1P20061 433 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-201ENST00000230480 VLDLRP98155 873 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 ZP4Q12836 540 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 FAPQ12884 760 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 TBPL2Q6SJ96 375 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-201ENST00000230480 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 GPAT4Q86UL3 456 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 ZNF100Q8IYN0 542 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 SCAIQ8N9R8 606 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 LIPHQ8WWY8 451 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 SLC7A6OSQ96CW6 309 aaPredicted RBP12.06□□□□□ -0.48
VEGFA-201ENST00000230480 MED18Q9BUE0 208 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 NDUFAF4Q9P032 175 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 EMC3Q9P0I2 261 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 NDRG3Q9UGV2 375 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 LRRC42Q9Y546 428 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 MED13LQ71F56 2210 aa12.06□□□□□ -0.48
VEGFA-201ENST00000230480 A0A087WUU8 490 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 TCRBV5S2A0A599 114 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 KPNA4O00629 521 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-201ENST00000230480 ARPC2O15144 300 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 ZNF682O95780 498 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 IFNA14P01570 189 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 MT-ND1P03886 318 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 MAKP20794 623 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 ATP6V1B2P21281 511 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 CLDN17P56750 224 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 ROR2Q01974 943 aaKnown RBP12.05□□□□□ -0.48
VEGFA-201ENST00000230480 TAF11Q15544 211 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 IFI44LQ53G44 452 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 CASP12Q6UXS9 341 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 STK32CQ86UX6 486 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 OFCC1Q8IZS5 231 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 LRRC75AQ8NAA5 344 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 PIK3C3Q8NEB9 887 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 STEAP2Q8NFT2 490 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 RNF217Q8TC41 542 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 KISS1RQ969F8 398 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-201ENST00000230480 DHRS1Q96LJ7 313 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 PRRC1Q96M27 445 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 OR2M2Q96R28 347 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 EMC6Q9BV81 110 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 HDHD5Q9BXW7 423 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 SLC19A3Q9BZV2 496 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 POLR2J2Q9GZM3 115 aaKnown RBP12.05□□□□□ -0.48
VEGFA-201ENST00000230480 POLR2J3Q9H1A7 115 aaKnown RBP12.05□□□□□ -0.48
VEGFA-201ENST00000230480 LRMDAQ9H2I8 198 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 MED29Q9NX70 200 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
VEGFA-201ENST00000230480 A0A1W2PR80 420 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 ZNF503-AS2A6NEH8 195 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 OR5H1A6NKK0 313 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 RAD51DO75771 328 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 IGF2P01344 180 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 THRBP10828 461 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 ACADSP16219 412 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 PPP3CBP16298 524 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 RUNX1T1Q06455 604 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 FOXD4Q12950 439 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-201ENST00000230480 SEC23BQ15437 767 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 NIPAL3Q6P499 406 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 TTC33Q6PID6 262 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-201ENST00000230480 WFDC8Q8IUA0 241 aa12.04□□□□□ -0.48
VEGFA-201ENST00000230480 OR5J2Q8NH18 312 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms