RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 LOXP28300 417 aaPredicted RBP11.17□□□□□ -0.62
LSM5-201ENST00000223084 TAB1Q15750 504 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 FXNQ16595 210 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 LINGO2Q7L985 606 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 WDFY1Q8IWB7 410 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 UEVLDQ8IX04 471 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 SCAIQ8N9R8 606 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 OR5J2Q8NH18 312 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 TMEM239Q8WW34 195 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 TXNDC15Q96J42 360 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 SLC19A3Q9BZV2 496 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 OR10A4Q9H209 315 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 MAN2C1Q9NTJ4 1040 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 MRPL39Q9NYK5 338 aaKnown RBP11.17□□□□□ -0.62
LSM5-201ENST00000223084 CCDC168Q8NDH2 2452 aa11.17□□□□□ -0.62
LSM5-201ENST00000223084 A0A1W2PR80 420 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 PDLIM1O00151 329 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 KRT33AO76009 404 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 ZNF432O94892 652 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 MT-ND1P03886 318 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 ADORA3P0DMS8 318 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 THRBP10828 461 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
LSM5-201ENST00000223084 CALB2P22676 271 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 RBM34P42696 430 aaKnown RBP11.16□□□□□ -0.62
LSM5-201ENST00000223084 POU3F1Q03052 451 aaPredicted RBP11.16□□□□□ -0.62
LSM5-201ENST00000223084 PUDPQ08623 228 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 ST3GAL3Q11203 375 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 CARD17Q5XLA6 110 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 NHLRC1Q6VVB1 395 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 TRPM8Q7Z2W7 1104 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
LSM5-201ENST00000223084 ALKBH3Q96Q83 286 aaPredicted RBP11.16□□□□□ -0.62
LSM5-201ENST00000223084 EMC6Q9BV81 110 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 GORASP2Q9H8Y8 452 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 FKRPQ9H9S5 495 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 NANSQ9NR45 359 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 MED29Q9NX70 200 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 TAS2R16Q9NYV7 291 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 TAS2R5Q9NYW4 299 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 MAGEL2Q9UJ55 1249 aa11.16□□□□□ -0.62
LSM5-201ENST00000223084 LOC102725191A0A1B0GVB3 256 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.15□□□□□ -0.62
LSM5-201ENST00000223084 hCG_2039718K7EN88 272 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 PDE5AO76074 875 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 OR7A10O76100 309 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 UBOX5O94941 541 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 DIRAS1O95057 198 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 PRSS23O95084 383 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 GOSR1O95249 250 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 HIST1H2ABP04908 130 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 ASAH2BP0C7U1 165 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 FUT1P19526 365 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 IFNA8P32881 189 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 VLDLRP98155 873 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 TBPL2Q6SJ96 375 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 SEZ6L2Q6UXD5 910 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 HIST3H2AQ7L7L0 130 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 CDH24Q86UP0 819 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 OFCC1Q8IZS5 231 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 POMGNT2Q8NAT1 580 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 OR52N5Q8NH56 324 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 HIST1H2ACQ93077 130 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 SGTBQ96EQ0 304 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 PLPPR2Q96GM1 343 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 PYURFQ96I23 114 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 NSMCE2Q96MF7 247 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 HS6ST2Q96MM7 605 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 OR2M2Q96R28 347 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 PLEKHF2Q9H8W4 249 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 ZNF229Q9UJW7 825 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 ITGB1BP2Q9UKP3 347 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 SAMD4AQ9UPU9 718 aaKnown RBP11.15□□□□□ -0.62
LSM5-201ENST00000223084 RCE1Q9Y256 329 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 MED31Q9Y3C7 131 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.62
LSM5-201ENST00000223084 SLC35F4A4IF30 521 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 OR5H1A6NKK0 313 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 ZNF587BE7ETH6 402 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 BLOC1S5-TXNDC5H3BN57 136 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 RNF13O43567 381 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 SLC43A1O75387 559 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 OR6A2O95222 327 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 PLAUP00749 431 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 IFI30P13284 250 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 IFNGR1P15260 489 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 ATP6V1B2P21281 511 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 MPGP29372 298 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 TRAM2Q15035 370 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 PPA1Q15181 289 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 GABRA6Q16445 453 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 BEX5Q5H9J7 111 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 TIMM23BQ5SRD1 257 aa11.14□□□□□ -0.63
LSM5-201ENST00000223084 PHYHD1Q5SRE7 291 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms