RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PODNL1Q6PEZ8 512 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 CARFQ8N187 725 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF775Q96BV0 537 aaPredicted RBP8.66□□□□□ -1.02
CCDC113-201ENST00000219299 WDR77Q9BQA1 342 aaPredicted RBP8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ATG5Q9H1Y0 275 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 TMEM38AQ9H6F2 299 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 PATJQ8NI35 1801 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 LNP1A1A4G5 178 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 K7ESF4 209 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 NDUFB2O95178 105 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 PPICP45877 212 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ACTBP60709 375 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ACTG1P63261 375 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ODF4Q2M2E3 257 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 DEFB109BQ30KR1 87 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 KCTD18Q6PI47 426 aaPredicted RBP8.66□□□□□ -1.02
CCDC113-201ENST00000219299 TMPRSS12Q86WS5 348 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ZFP41Q8N8Y5 198 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF565Q8N9K5 539 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 CNOT2Q9NZN8 540 aaKnown RBP8.66□□□□□ -1.02
CCDC113-201ENST00000219299 KLHL21Q9UJP4 597 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 TMEM14AQ9Y6G1 99 aa8.66□□□□□ -1.02
CCDC113-201ENST00000219299 HMGN4O00479 90 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 OR2J2O76002 312 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ALDOBP05062 364 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 BMP4P12644 408 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TACR3P29371 465 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 RGS6P49758 472 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 MC2RQ01718 297 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 GNMTQ14749 295 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 RHBDD2Q6NTF9 364 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF529Q6P280 563 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 LINC00299Q6ZSB3 139 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TRMT10AQ8TBZ6 339 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 LMF2Q9BU23 707 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ASF1BQ9NVP2 202 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 POU2F3Q9UKI9 436 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ALPK2Q86TB3 2170 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TRBV2A0A0J9YWF9 115 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TOX3O15405 576 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ICMTO60725 284 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 SPDEFO95238 335 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 WISP3O95389 354 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 DDAH2O95865 285 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 PRR35P0CG20 571 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 PRKCAP17252 672 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 POU3F2P20265 443 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ACVR1BP36896 505 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 RAE1P78406 368 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 CHAF1BQ13112 559 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TATDN3Q17R31 274 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TXNDC15Q96J42 360 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 OR5B12Q96R08 314 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 OR2M2Q96R28 347 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 MRPL15Q9P015 296 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 SLC33A1O00400 549 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 GOSR2O14653 212 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 PHYHO14832 338 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ANKRD28O15084 1053 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 CAPNS1P04632 268 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 PEBP1P30086 187 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 HERV-K104P61576 105 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 RPS18P62269 152 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ESCO2Q56NI9 601 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 ALG10Q5BKT4 473 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TCTN3Q6NUS6 607 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 OVCH1Q7RTY7 1134 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 D2HGDHQ8N465 521 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 DNAJC22Q8N4W6 341 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TEX19Q8NA77 164 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 TMEM185AQ8NFB2 350 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 THAP4Q8WY91 577 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 UCN3Q969E3 161 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 IP6K3Q96PC2 410 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 STACQ99469 402 aa8.65□□□□□ -1.02
CCDC113-201ENST00000219299 THAP7Q9BT49 309 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 RANGRFQ9HD47 186 aaPredicted RBP8.65□□□□□ -1.02
CCDC113-201ENST00000219299 DCDC2BA2VCK2 349 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.03
CCDC113-201ENST00000219299 GALR2O43603 387 aaPredicted RBP8.65□□□□□ -1.03
CCDC113-201ENST00000219299 IFNA1P01562 189 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.03
CCDC113-201ENST00000219299 BTN1A1Q13410 526 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 SAXO2Q658L1 398 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 B3GNT8Q7Z7M8 397 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 ACBD4Q8NC06 268 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 SLC6A7Q99884 636 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 MFFQ9GZY8 342 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 FN3KQ9H479 309 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 A4GALTQ9NPC4 353 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 OLAHQ9NV23 265 aa8.65□□□□□ -1.03
CCDC113-201ENST00000219299 COL6A6A6NMZ7 2263 aa8.64□□□□□ -1.03
CCDC113-201ENST00000219299 A0A1W2PPK0 400 aa8.64□□□□□ -1.03
CCDC113-201ENST00000219299 TVP23AA6NH52 213 aa8.64□□□□□ -1.03
CCDC113-201ENST00000219299 FAM171A2A8MVW0 826 aa8.64□□□□□ -1.03
CCDC113-201ENST00000219299 SGCEO43556 437 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms