RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 ALG12Q9BV10 488 aa20.22■□□□□ 0.83
HTATSF1-201ENST00000218364 PLA2G2FQ9BZM2 168 aa20.22■□□□□ 0.83
HTATSF1-201ENST00000218364 SLC6A17Q9H1V8 727 aa20.22■□□□□ 0.83
HTATSF1-201ENST00000218364 TCF7L1Q9HCS4 588 aa20.22■□□□□ 0.83
HTATSF1-201ENST00000218364 RXFP3Q9NSD7 469 aa20.22■□□□□ 0.83
HTATSF1-201ENST00000218364 PSMD9O00233 223 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 PTHLHP12272 177 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 ADRA2CP18825 462 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 GPR18Q14330 331 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 FAAP20Q6NZ36 180 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 WSB2Q9NYS7 404 aaPredicted RBP20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 TRBV5-5A0A0J9YX44 114 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 MFSD2BA6NFX1 497 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 CDK2AP1O14519 115 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 FOXS1O43638 330 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 UPK3AO75631 287 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 TACSTD2P09758 323 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 PVRP15151 417 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 ZP3P21754 424 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 MAPK3P27361 379 aaPredicted RBP20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 KIR2DL1P43626 348 aaPredicted RBP20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 PRPS1P60891 318 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 PXDC1Q5TGL8 231 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 SLC16A9Q7RTY1 509 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 LRRTM1Q86UE6 522 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 TSACCQ96A04 125 aaPredicted RBP20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 WDR92Q96MX6 357 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 VSTM2LQ96N03 204 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 PPA2Q9H2U2 334 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 KCNMB2Q9Y691 235 aa20.21■□□□□ 0.83
HTATSF1-201ENST00000218364 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 OR10H2O60403 315 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 GLSO94925 669 aaPredicted RBP20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 HOXD4P09016 255 aaPredicted RBP20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 SLC25A1P53007 311 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 OR5M10Q6IEU7 315 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 EXD3Q8N9H8 876 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 DNAAF1Q8NEP3 725 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 HMGB4Q8WW32 186 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 A0A1B0GVT2 93 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 ALKBH1Q13686 389 aaKnown RBP20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 GXYLT1Q4G148 440 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 RGS7BPQ6MZT1 257 aaPredicted RBP20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 CSNK1A1LQ8N752 337 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 SLC19A3Q9BZV2 496 aa20.2■□□□□ 0.82
HTATSF1-201ENST00000218364 A0A087WV48 116 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 GRPRP30550 384 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 CDKN2AP42771 156 aaKnown RBP20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 PSMD4P55036 377 aaKnown RBP20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 SEC13P55735 322 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 SCAND1P57086 179 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 CSRP2Q16527 193 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 LEG1Q6P5S2 330 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 LRRN1Q6UXK5 716 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 SDHAF2Q9NX18 166 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 COQ3Q9NZJ6 369 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 C2orf16Q68DN1 1984 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 B3GALNT1O75752 331 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 EGFP01133 1207 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 HIST1H2ABP04908 130 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 B3GNTL1Q67FW5 361 aaPredicted RBP20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 HIST3H2AQ7L7L0 130 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 SLC36A1Q7Z2H8 476 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 OR5AK2Q8NH90 309 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 HIST1H2ACQ93077 130 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 CD93Q9NPY3 652 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 FRRS1LQ9P0K9 344 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 MRM2Q9UI43 246 aaKnown RBP20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 MOKQ9UQ07 419 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 SCN2AQ99250 2005 aa20.19■□□□□ 0.82
HTATSF1-201ENST00000218364 HMSDA8MTL9 139 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 K7EQS6 105 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 SUSD5O60279 629 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 CSRP1P21291 193 aaKnown RBP20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 CALCRP30988 508 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 FAM220AQ7Z4H9 259 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 YAF2Q8IY57 180 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 ZNF511Q8NB15 262 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 RCBTB1Q8NDN9 531 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 PNPLA2Q96AD5 504 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 C3orf49Q96BT1 292 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 WDR89Q96FK6 387 aaPredicted RBP20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 C2orf74A8MZ97 194 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 RGS11O94810 467 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 APBB3O95704 486 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 ABHD16AO95870 558 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 OR8G3PP0DMU2 310 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 DLX5P56178 289 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 HLXQ14774 488 aaPredicted RBP20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 NDUFAF6Q330K2 333 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 TMEM240Q5SV17 173 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 LIPNQ5VXI9 398 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 NPSR1Q6W5P4 371 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 GLB1L2Q8IW92 636 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 ZNF595Q8IYB9 648 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 SFXN1Q9H9B4 322 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 KLHDC2Q9Y2U9 406 aa20.18■□□□□ 0.82
HTATSF1-201ENST00000218364 FAM171A2A8MVW0 826 aa20.17■□□□□ 0.82
HTATSF1-201ENST00000218364 H0Y8X5 98 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms