RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MRPL39Q9NYK5 338 aaKnown RBP11.73□□□□□ -0.53
GTF3A-209ENST00000640289 B3GAT1Q9P2W7 334 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF229Q9UJW7 825 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 RASD1Q9Y272 281 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 B3GALT5Q9Y2C3 310 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 FLVCR1Q9Y5Y0 555 aa11.73□□□□□ -0.53
GTF3A-209ENST00000640289 PHF3Q92576 2039 aaKnown RBP11.72□□□□□ -0.53
GTF3A-209ENST00000640289 SH3PXD2BA1X283 911 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ERICH4A6NGS2 130 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 PLPP3O14495 311 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 CDC42EP2O14613 210 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 TIPRLO75663 272 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 SERPINI2O75830 405 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 VAMP5O95183 116 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 CLDN1O95832 211 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ADORA3P0DMS8 318 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 GPR4P46093 362 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ACTR3P61158 418 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 SLC25A35Q3KQZ1 300 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 NANOGNBQ7Z5D8 188 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 GALNT5Q7Z7M9 940 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 EPHX4Q8IUS5 362 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ZIC4Q8N9L1 334 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 SCAIQ8N9R8 606 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF610Q8N9Z0 462 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ADPRHL1Q8NDY3 354 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 OR4C15Q8NGM1 316 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 FAM46AQ96IP4 442 aaKnown RBP11.72□□□□□ -0.53
GTF3A-209ENST00000640289 OXGR1Q96P68 337 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 SF3B5Q9BWJ5 86 aaKnown RBP11.72□□□□□ -0.53
GTF3A-209ENST00000640289 PIGMQ9H3S5 423 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 KCNJ16Q9NPI9 418 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 EMC3Q9P0I2 261 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 NOSIPQ9Y314 301 aaKnown RBP11.72□□□□□ -0.53
GTF3A-209ENST00000640289 U3KQV3 271 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 MYO7BQ6PIF6 2116 aa11.72□□□□□ -0.53
GTF3A-209ENST00000640289 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
GTF3A-209ENST00000640289 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
GTF3A-209ENST00000640289 ARHGAP21Q5T5U3 1957 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 EFCAB9A8MZ26 197 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 BLOC1S5-TXNDC5H3BN57 136 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 C19orf84I3L1E1 186 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 GPR171O14626 319 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 OR10H3O60404 316 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 KRT36O76013 467 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 HIST1H2ABP04908 130 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 SAGP10523 405 aaPredicted RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 CD8BP10966 210 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF43P17038 809 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 AHCYP23526 432 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 GRNP28799 593 aaKnown RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 AQP2P41181 271 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 OMPP47874 163 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 HMGA2P52926 109 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 IST1P53990 364 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 TFF3Q07654 80 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 PUDPQ08623 228 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 POU4F3Q15319 338 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 EEF1A1P5Q5VTE0 462 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF474Q6S9Z5 364 aaPredicted RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 TFAP2EQ6VUC0 442 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 CREB3L2Q70SY1 520 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 HIST3H2AQ7L7L0 130 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 TMEM179BQ7Z7N9 219 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 MOSPD2Q8NHP6 518 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 LIPHQ8WWY8 451 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 HIST1H2ACQ93077 130 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 RAB3IPQ96QF0 476 aaPredicted RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 GPA33Q99795 319 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 TACO1Q9BSH4 297 aaKnown RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 DENND2DQ9H6A0 471 aaPredicted RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 REEP1Q9H902 201 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 PLSCR4Q9NRQ2 329 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.53
GTF3A-209ENST00000640289 SAMHD1Q9Y3Z3 626 aaKnown RBP11.71□□□□□ -0.53
GTF3A-209ENST00000640289 HIVEP3Q5T1R4 2406 aa11.71□□□□□ -0.54
GTF3A-209ENST00000640289 TRAV27A0A087WT01 109 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 A8MXE2 369 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 GNGT2O14610 69 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 MSTNO14793 375 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 RNF13O43567 381 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 TRAF3IP2O43734 574 aaPredicted RBP11.7□□□□□ -0.54
GTF3A-209ENST00000640289 OR6A2O95222 327 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 IGHV3-9P01782 118 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 ASCL1P50553 236 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 CLDN17P56750 224 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 POU3F1Q03052 451 aaPredicted RBP11.7□□□□□ -0.54
GTF3A-209ENST00000640289 RPL18Q07020 188 aaKnown RBP11.7□□□□□ -0.54
GTF3A-209ENST00000640289 ZP4Q12836 540 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 FHL1Q13642 323 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 C1DQ13901 141 aaKnown RBP11.7□□□□□ -0.54
GTF3A-209ENST00000640289 PGBD2Q6P3X8 592 aa11.7□□□□□ -0.54
GTF3A-209ENST00000640289 CASP12Q6UXS9 341 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms