RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	ZNF44	P15621	663 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ITPKB	P27987	946 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TEAD1	P28347	426 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PBLD	P30039	288 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	MPI	P34949	423 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	EIF2S3	P41091	472 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	NCBP2	P52298	156 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PRKAG1	P54619	331 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	SCAND1	P57086	179 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TRA2B	P62995	288 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PJVK	Q0ZLH3	352 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	CRMP1	Q14194	572 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	IRF4	Q15306	451 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	LCTL	Q6UWM7	567 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	NDUFAF7	Q7L592	441 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TMEM200A	Q86VY9	491 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TMEM173	Q86WV6	379 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PAQR8	Q8TEZ7	354 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TCTEX1D2	Q8WW35	142 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	HIST1H2BA	Q96A08	127 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ZDHHC12	Q96GR4	267 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PDCD1LG2	Q9BQ51	273 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TTTY10	Q9BZA0	68 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	CHST6	Q9GZX3	395 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	SFXN1	Q9H9B4	322 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ADAM29	Q9UKF5	820 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708		Q9Y3F1	56 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	KCNE3	Q9Y6H6	103 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	GXYLT2	A0PJZ3	443 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708		F8VVB4	439 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708		F8VWA3	439 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TXNL1	O43396	289 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	OR2T7	P0C7T2	308 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	CTSA	P10619	480 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	GTF2F2	P13984	249 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	MAK	P20794	623 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	CERS1	P27544	350 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	GPX4	P36969	197 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PMEL	P40967	661 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	PPT1	P50897	306 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	SSBP1	Q04837	148 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	INPP5J	Q15735	1006 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ZNF124	Q15973	351 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ZNF658B	Q4V348	819 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	LRRC73	Q5JTD7	316 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	CLLU1OS	Q5K130	101 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ZNF425	Q6IV72	752 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	C17orf99	Q6UX52	265 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	STX12	Q86Y82	276 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	DND1	Q8IYX4	353 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	POMGNT2	Q8NAT1	580 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	OR2T27	Q8NH04	317 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	RNF141	Q8WVD5	230 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	ZC3H10	Q96K80	434 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	OR7D2	Q96RA2	312 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	CNN2	Q99439	309 aa	Known RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	TREM2	Q9NZC2	230 aa		10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.18	□□□□□ -0.78
STRADA-231	ENST00000638708	NDUFS4	O43181	175 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	OR2T1	O43869	369 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	KLK3	P07288	261 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	TPT1	P13693	172 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	MUC1	P15941	1255 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	FUT1	P19526	365 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	PTN	P21246	168 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	NAAA	Q02083	359 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	TGM3	Q08188	693 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	GFOD2	Q3B7J2	385 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	BEX5	Q5H9J7	111 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	LIPN	Q5VXI9	398 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	ZCCHC12	Q6PEW1	402 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	THSD4	Q6ZMP0	1018 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	HSD11B1L	Q7Z5J1	315 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	SLC30A7	Q8NEW0	376 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	SDR9C7	Q8NEX9	313 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	GTF3A	Q92664	365 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	ZNF689	Q96CS4	500 aa	Predicted RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	C14orf79	Q96F83	325 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	MNT	Q99583	582 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	PRSS27	Q9BQR3	290 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	TMPRSS5	Q9H3S3	457 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	PELI2	Q9HAT8	420 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	MRPS30	Q9NP92	439 aa	Known RBP	10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	C2orf42	Q9NWW7	574 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	WBP1L	Q9NX94	342 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	GNG8	Q9UK08	70 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	ICAM5	Q9UMF0	924 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	PCNT	O95613	3336 aa		10.17	□□□□□ -0.78
STRADA-231	ENST00000638708	WASH3P	C4AMC7	463 aa		10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	CD74	P04233	296 aa		10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	ANXA2	P07355	339 aa	Known RBP	10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	OR8U8	P0C7N1	319 aa		10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	APEH	P13798	732 aa	Known RBP	10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	CD34	P28906	385 aa		10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	SDHA	P31040	664 aa		10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	CSNK1E	P49674	416 aa	Known RBP	10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	LTB	Q06643	244 aa		10.16	□□□□□ -0.78
STRADA-231	ENST00000638708	GGTLC2	Q14390	218 aa		10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms