RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TBC1D3FA6NER0 549 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 ANTXRLA6NF34 631 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SLC22A31A6NKX4 558 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TBC1D3LB9A6J9 549 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SEPT4O43236 478 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 PIP5K1CO60331 668 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 GNRH1P01148 92 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 IFNA17P01571 189 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SFTA3P0C7M3 94 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 FAM157CP0CG43 387 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 GABRR2P28476 465 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 FRKP42685 505 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 RBM34P42696 430 aaKnown RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 MAGEB1P43366 347 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TAS2R50P59544 299 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 HSD11B2P80365 405 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 B4GALNT1Q00973 533 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 DHCR24Q15392 516 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 DECR1Q16698 335 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 ALG11Q2TAA5 492 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 CLEC12AQ5QGZ9 265 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 NSUN5P2Q63ZY6 315 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TBC1D3CQ6IPX1 549 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 PWWP2BQ6NUJ5 590 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 MAMDC2Q7Z304 686 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 COMTD1Q86VU5 262 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 NUDT13Q86X67 352 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TBC1D3Q8IZP1 549 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SMIM19Q96E16 107 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 FAM83CQ9BQN1 747 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 ZNF426Q9BUY5 554 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 LAT2Q9GZY6 243 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 METTL9Q9H1A3 318 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 UNKLQ9H9P5 680 aaKnown RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 GAR1Q9NY12 217 aaKnown RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TAAR2Q9P1P5 351 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 CACFD1Q9UGQ2 172 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 ANAPC1Q9H1A4 1944 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 RNASEK-C17orf49H0YIS7 233 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 KLHL18O94889 574 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 GLSO94925 669 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 FARS2O95363 451 aaKnown RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 VNN2O95498 520 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SNAI1O95863 264 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 PSEN2P49810 448 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 CCL23P55773 120 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 RGS8P57771 180 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TAS2R20P59543 309 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 UBE2MP61081 183 aaKnown RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 MC1RQ01726 317 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 CCINQ13939 588 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 IRF4Q15306 451 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 ZNF311Q5JNZ3 666 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 RNF219Q5W0B1 726 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 TNFAIP8L2Q6P589 184 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 BAP18Q8IXM2 172 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 STEAP2Q8NFT2 490 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 OR2G2Q8NGZ5 317 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SMPDL3AQ92484 453 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 UBE2E3Q969T4 207 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 PLD4Q96BZ4 506 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SMIM8Q96KF7 97 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 C4orf36Q96KX1 117 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 GPR62Q9BZJ7 368 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 ANKRD10Q9NXR5 420 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 LPAR3Q9UBY5 353 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 SLC35A3Q9Y2D2 325 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 AK6Q9Y3D8 172 aaKnown RBP11.04□□□□□ -0.64
CAPN3-221ENST00000638141 PRKAB1Q9Y478 270 aa11.04□□□□□ -0.64
CAPN3-221ENST00000638141 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-221ENST00000638141 FAM157AC9JC47 383 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 M0QZ92 97 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 MBTPS2O43462 519 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 SLCO2B1O94956 709 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 CLDN7O95471 211 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 EPPINO95925 133 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 CH25HO95992 272 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 CRYABP02511 175 aaKnown RBP11.03□□□□□ -0.64
CAPN3-221ENST00000638141 CATP04040 527 aaKnown RBP11.03□□□□□ -0.64
CAPN3-221ENST00000638141 AKAIN1P0CW23 69 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
CAPN3-221ENST00000638141 ACY1Q03154 408 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 ST3GAL3Q11203 375 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 SKP2Q13309 424 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 BIKQ13323 160 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 RBM39Q14498 530 aaKnown RBP11.03□□□□□ -0.64
CAPN3-221ENST00000638141 MLC1Q15049 377 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 LIPNQ5VXI9 398 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 NPSR1Q6W5P4 371 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 PNLDC1Q8NA58 520 aaKnown RBP11.03□□□□□ -0.64
CAPN3-221ENST00000638141 SVIPQ8NHG7 77 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 LINC01599Q8WXQ3 324 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 DERL3Q96Q80 235 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 OR5B2Q96R09 309 aa11.03□□□□□ -0.64
CAPN3-221ENST00000638141 MRPS30Q9NP92 439 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms