RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 IFNEQ86WN2 208 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PLA2G4DQ86XP0 818 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ECHDC2Q86YB7 292 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 C9orf40Q8IXQ3 194 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 MKXQ8IYA7 352 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC36Q8IYA8 594 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ENTHD1Q8IYW4 607 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 BPIFB2Q8N4F0 458 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CHCHD4Q8N4Q1 142 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ARFGAP2Q8N6H7 521 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM252Q8N6L7 170 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 METTL13Q8N6R0 699 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF713Q8N859 430 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ARL10Q8N8L6 244 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF740Q8NDX6 193 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 OR52E1Q8NGJ3 308 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 OR10T2Q8NGX3 314 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PPTC7Q8NI37 304 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ADAMTS16Q8TE57 1224 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 RNF138Q8WVD3 245 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 IL1F10Q8WWZ1 152 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 RSPH1Q8WYR4 309 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 P3H4Q92791 437 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 TOP1MTQ969P6 601 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC47Q96A33 483 aaKnown RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 RAB7BQ96AH8 199 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 C18orf25Q96B23 403 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ELSPBP1Q96BH3 223 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PINX1Q96BK5 328 aaKnown RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 FGGYQ96C11 551 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 STARD4Q96DR4 205 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF285Q96NJ3 590 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 TECTBQ96PL2 329 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 SMIM14Q96QK8 99 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PLIN2Q99541 437 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 FTHL17Q9BXU8 183 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 UPF3BQ9BZI7 483 aaKnown RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 RAB17Q9H0T7 212 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ATG10Q9H0Y0 220 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 POLR3FQ9H1D9 316 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 RWDD1Q9H446 243 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 GLIPR2Q9H4G4 154 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 EHD1Q9H4M9 534 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 SYNDIG1Q9H7V2 258 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 COG4Q9H9E3 785 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CAB39LQ9H9S4 337 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 LY9Q9HBG7 655 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 TRPV5Q9NQA5 729 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 XPNPEP1Q9NQW7 623 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF302Q9NR11 478 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PRMT8Q9NR22 394 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PAK1IP1Q9NWT1 392 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 UTP6Q9NYH9 597 aaKnown RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 RDH8Q9NYR8 311 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 P2RX2Q9UBL9 471 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 SPASTQ9UBP0 616 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 HMGXB4Q9UGU5 601 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ATP6V1HQ9UI12 483 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 XPO7Q9UIA9 1087 aaKnown RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CRLS1Q9UJA2 301 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 DNPEPQ9ULA0 475 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF490Q9ULM2 529 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 UBQLN1Q9UMX0 589 aaKnown RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CCL26Q9Y258 94 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 CA5BQ9Y2D0 317 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 PLLPQ9Y342 182 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 TEX264Q9Y6I9 313 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF462Q96JM2 2506 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 POLEQ07864 2286 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 NUP214P35658 2090 aaPredicted RBP0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 DOCK11Q5JSL3 2073 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 DSCAML1Q8TD84 2053 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 LOC400499M0QZD8 3231 aa0.76□□□□□ -2.29
SMARCB1-209ENST00000635578 MYO9AB2RTY4 2548 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 RELNP78509 3460 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 COL1A2P08123 1366 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 FREM2Q5SZK8 3169 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TTC41PQ6P2S7 1318 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 HMCN1Q96RW7 5635 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 IGLV3-16A0A075B6K0 115 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 IGKV6-21A0A0C4DH24 114 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 A0A0J9YXY3 114 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 MBLAC1A4D2B0 266 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 GOLGA8IPA6NC78 632 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 KRT87PA6NCN2 255 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 A6NDX4 124 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TUBAL3A6NHL2 446 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZSCAN5BA6NJL1 495 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 GOLGA8JA6NMD2 632 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 WASH3PC4AMC7 463 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 C5orf67F2Z3F1 127 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 M0QZ92 97 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZBTB5O15062 677 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ALOX15BO15296 676 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 MSH4O15457 936 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TRIM3O75382 744 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CA11O75493 328 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TOM1L1O75674 476 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SCRG1O75711 98 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CABYRO75952 493 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms