RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 OBP2BQ9NPH6 170 aa19.66■□□□□ 0.74
SF1-220ENST00000626028 MGAT4BQ9UQ53 548 aa19.66■□□□□ 0.74
SF1-220ENST00000626028 AMDHD2Q9Y303 409 aa19.66■□□□□ 0.74
SF1-220ENST00000626028 SLC25A15Q9Y619 301 aa19.66■□□□□ 0.74
SF1-220ENST00000626028 ALPK2Q86TB3 2170 aa19.66■□□□□ 0.74
SF1-220ENST00000626028 TRAPPC13A5PLN9 417 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 FAM220BPB1ANY3 271 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 M0R3H8 397 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 NDUFAB1O14561 156 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 AKAP8O43823 692 aaKnown RBP19.65■□□□□ 0.74
SF1-220ENST00000626028 CRYBA2P53672 197 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 ADAM8P78325 824 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 SF3A3Q12874 501 aaKnown RBP eCLIP19.65■□□□□ 0.742e-9■■■□□ 17.1
SF1-220ENST00000626028 ENTPD8Q5MY95 495 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 PRSS57Q6UWY2 283 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 SPATA21Q7Z572 469 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 ADAMTS16Q8TE57 1224 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 HOPXQ9BPY8 73 aaPredicted RBP19.65■□□□□ 0.74
SF1-220ENST00000626028 WFDC6Q9BQY6 131 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 TMUB1Q9BVT8 246 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 ASPNQ9BXN1 380 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 SLC19A3Q9BZV2 496 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 NSRP1Q9H0G5 558 aaKnown RBP19.65■□□□□ 0.74
SF1-220ENST00000626028 MOV10Q9HCE1 1003 aaKnown RBP19.65■□□□□ 0.74
SF1-220ENST00000626028 ARMCX1Q9P291 453 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 B3GAT1Q9P2W7 334 aa19.65■□□□□ 0.74
SF1-220ENST00000626028 DPRXA6NFQ7 191 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 ZNF587BE7ETH6 402 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 M0R082 166 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 KRT33AO76009 404 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 PLAUP00749 431 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 FOSL1P15407 271 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 PTAFRP25105 342 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 GRPRP30550 384 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 SH3BGRP55822 239 aaPredicted RBP19.64■□□□□ 0.73
SF1-220ENST00000626028 NPTX1Q15818 432 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 ALKBH2Q6NS38 261 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 OR2T12Q8NG77 320 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 ZNF417Q8TAU3 575 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 RNF217Q8TC41 542 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 AKAP1Q92667 903 aaKnown RBP eCLIP19.64■□□□□ 0.73
SF1-220ENST00000626028 FBXW5Q969U6 566 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 RCN3Q96D15 328 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 ZNF587Q96SQ5 575 aaPredicted RBP19.64■□□□□ 0.73
SF1-220ENST00000626028 CXorf56Q9H5V9 222 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 EFCAB1Q9HAE3 211 aa19.64■□□□□ 0.73
SF1-220ENST00000626028 MRPL39Q9NYK5 338 aaKnown RBP19.64■□□□□ 0.73
SF1-220ENST00000626028 ACANP16112 2415 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 BGLAPP02818 100 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 COX4I1P13073 169 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 CD99P14209 185 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 NKX6-1P78426 367 aaPredicted RBP19.63■□□□□ 0.73
SF1-220ENST00000626028 C1DQ13901 141 aaKnown RBP19.63■□□□□ 0.73
SF1-220ENST00000626028 ZNF672Q499Z4 452 aaPredicted RBP19.63■□□□□ 0.73
SF1-220ENST00000626028 HACD2Q6Y1H2 254 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 TMEM171Q8WVE6 324 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 ZNF426Q9BUY5 554 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 GSX2Q9BZM3 304 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 SLC17A5Q9NRA2 495 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 NOX1Q9Y5S8 564 aa19.63■□□□□ 0.73
SF1-220ENST00000626028 ZNF469Q96JG9 3925 aaPredicted RBP19.62■□□□□ 0.73
SF1-220ENST00000626028 ELOVL7A1L3X0 281 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 RPL36A-HNRNPH2H7BZ11 118 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 CLOCKO15516 846 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 ZNF432O94892 652 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 WNT11O96014 354 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 HOXB1P14653 301 aaPredicted RBP19.62■□□□□ 0.73
SF1-220ENST00000626028 KDELR2P33947 212 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 SELENOPP49908 381 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 PRPS1P60891 318 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 NIPAL3Q6P499 406 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 TTC33Q6PID6 262 aaPredicted RBP19.62■□□□□ 0.73
SF1-220ENST00000626028 MICU2Q8IYU8 434 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 OR52N5Q8NH56 324 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 LILRB1Q8NHL6 650 aaPredicted RBP19.62■□□□□ 0.73
SF1-220ENST00000626028 CMTM5Q96DZ9 223 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 GRIP2Q9C0E4 1043 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 SH3GLB1Q9Y371 365 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 VPS13CQ709C8 3753 aa19.62■□□□□ 0.73
SF1-220ENST00000626028 USF3Q68DE3 2245 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 CPSF4LA6NMK7 179 aaKnown RBP19.61■□□□□ 0.73
SF1-220ENST00000626028 SLC43A1O75387 559 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 IGF2P01344 180 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 THRBP10828 461 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 NQO1P15559 274 aaKnown RBP19.61■□□□□ 0.73
SF1-220ENST00000626028 CLDN17P56750 224 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 PUDPQ08623 228 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 KLHL24Q6TFL4 600 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 PXKQ7Z7A4 578 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 P3H2Q8IVL5 708 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 UEVLDQ8IX04 471 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 POU5F2Q8N7G0 328 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 PIK3C3Q8NEB9 887 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 OR4D11Q8NGI4 311 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 VANGL1Q8TAA9 524 aaPredicted RBP19.61■□□□□ 0.73
SF1-220ENST00000626028 MAGEE2Q8TD90 523 aaPredicted RBP19.61■□□□□ 0.73
SF1-220ENST00000626028 ELAC2Q9BQ52 826 aaKnown RBP19.61■□□□□ 0.73
SF1-220ENST00000626028 ZNF701Q9NV72 531 aaPredicted RBP19.61■□□□□ 0.73
SF1-220ENST00000626028 FAIMQ9NVQ4 179 aa19.61■□□□□ 0.73
SF1-220ENST00000626028 NPAP1Q9NZP6 1156 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms