RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 NHLRC1Q6VVB1 395 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 SPATA21Q7Z572 469 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 SERPINA11Q86U17 422 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 LINC01356Q8N9X3 169 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 SEMA6DQ8NFY4 1073 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 OR4F15Q8NGB8 312 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 OR52P1PQ8NH57 321 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 SLC38A5Q8WUX1 472 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 HPS1Q92902 700 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 KTI12Q96EK9 354 aaPredicted RBP9.53□□□□□ -0.88
DDX41-218ENST00000625286 PANX1Q96RD7 426 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 RAB1BQ9H0U4 201 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 TPK1Q9H3S4 243 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 ZNF442Q9H7R0 627 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 MEAF6Q9HAF1 191 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 GPR35Q9HC97 309 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 B3GNT2Q9NY97 397 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 HAO1Q9UJM8 370 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 GPR45Q9Y5Y3 372 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 WNK2Q9Y3S1 2297 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 FAM157AC9JC47 383 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 SDHDO14521 159 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 FZD7O75084 574 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 SEC14L2O76054 403 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 VAMP5O95183 116 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 MYZAPP0CAP1 466 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 ETFAP13804 333 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 RPS5P46782 204 aaKnown RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 SLC1A6P48664 564 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 CLNS1AP54105 237 aaKnown RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 VSNL1P62760 191 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 DPY19L1Q2PZI1 675 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 GTDC1Q4AE62 458 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 PRAMEF8Q5VWM4 474 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 PRAMEF7Q5VXH5 474 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 OGFOD2Q6N063 350 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 ABHD12BQ7Z5M8 362 aaPredicted RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 MDP1Q86V88 176 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 COMTD1Q86VU5 262 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 TMEM123Q8N131 208 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 MFSD8Q8NHS3 518 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 UBASH3BQ8TF42 649 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 NEU4Q8WWR8 484 aaPredicted RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 VPS33AQ96AX1 596 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 ZBTB9Q96C00 473 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 SLC25A36Q96CQ1 311 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 OR52E6Q96RD3 313 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 KCNS3Q9BQ31 491 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 TAPBPLQ9BX59 468 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 MRPL37Q9BZE1 423 aaKnown RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 RACGAP1Q9H0H5 632 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 AIG1Q9NVV5 245 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 RASD1Q9Y272 281 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 ZNF443Q9Y2A4 671 aaPredicted RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.89
DDX41-218ENST00000625286 ARHGAP32A7KAX9 2087 aa9.52□□□□□ -0.89
DDX41-218ENST00000625286 CMYA5Q8N3K9 4069 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 IGKV1D-42A0A075B6H8 117 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 OR6C65A6NJZ3 312 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 MS4A18H0YCH9 400 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 HPRP00739 348 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 HPXP02790 462 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 NUDT7P0C024 238 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 HLA-DOBP13765 273 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 IFNGR1P15260 489 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 EGR1P18146 543 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 BGNP21810 368 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 NR4A1P22736 598 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 SEC24CP53992 1094 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 DVL1P1P54792 670 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 AQP5P55064 265 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 NPRL3Q12980 569 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 CEACAM16Q2WEN9 425 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 MS4A18Q3C1V0 323 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 RNF220Q5VTB9 566 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 ATG16L1Q676U5 607 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 KRT80Q6KB66 452 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 RINLQ6ZS11 566 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 C1orf229Q6ZS94 237 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 LRP11Q86VZ4 500 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 PEX5LQ8IYB4 626 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 ANKK1Q8NFD2 765 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 STK35Q8TDR2 534 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 TAAR8Q969N4 342 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 ZNF317Q96PQ6 595 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 OR2M2Q96R28 347 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 ROPN1BQ9BZX4 212 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 WDR55Q9H6Y2 383 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 ROPN1Q9HAT0 212 aaPredicted RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 CRLF2Q9HC73 371 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 ZNF224Q9NZL3 707 aa9.51□□□□□ -0.89
DDX41-218ENST00000625286 MYEF2Q9P2K5 600 aaKnown RBP9.51□□□□□ -0.89
DDX41-218ENST00000625286 BIRC5O15392 142 aa9.5□□□□□ -0.89
DDX41-218ENST00000625286 TRAF3IP2O43734 574 aaPredicted RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 RGS9O75916 674 aaPredicted RBP9.5□□□□□ -0.89
DDX41-218ENST00000625286 AVPP01185 164 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms