RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ZCCHC24Q8N2G6 241 aaKnown RBP16.46■□□□□ 0.23
SMN1-211ENST00000625245 MAGEE2Q8TD90 523 aaPredicted RBP16.46■□□□□ 0.23
SMN1-211ENST00000625245 SLC38A5Q8WUX1 472 aa16.46■□□□□ 0.23
SMN1-211ENST00000625245 ZNF317Q96PQ6 595 aaPredicted RBP16.46■□□□□ 0.23
SMN1-211ENST00000625245 LINC00470Q9BZP3 86 aa16.46■□□□□ 0.23
SMN1-211ENST00000625245 SSU72Q9NP77 194 aaKnown RBP16.46■□□□□ 0.23
SMN1-211ENST00000625245 PRDM4Q9UKN5 801 aa16.46■□□□□ 0.23
SMN1-211ENST00000625245 A0A096LPI6 279 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 IGLV1-44P01699 117 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 ERCC1P07992 297 aaPredicted RBP16.45■□□□□ 0.22
SMN1-211ENST00000625245 PNMTP11086 282 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 HOXB1P14653 301 aaPredicted RBP16.45■□□□□ 0.22
SMN1-211ENST00000625245 DAOP14920 347 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 ZNF43P17038 809 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 NPR2P20594 1047 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 RPS5P46782 204 aaKnown RBP16.45■□□□□ 0.22
SMN1-211ENST00000625245 SH3BGRP55822 239 aaPredicted RBP16.45■□□□□ 0.22
SMN1-211ENST00000625245 HGFACQ04756 655 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 ZSWIM7Q19AV6 140 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 C3orf36Q3SXR2 165 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 RNF220Q5VTB9 566 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 SPATA21Q7Z572 469 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 SVOPLQ8N434 492 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 GLB1L3Q8NCI6 653 aaPredicted RBP16.45■□□□□ 0.22
SMN1-211ENST00000625245 MFSD8Q8NHS3 518 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 STK35Q8TDR2 534 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 NELFAQ9H3P2 528 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 ARMC7Q9H6L4 198 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 DSPPQ9NZW4 1301 aa16.45■□□□□ 0.22
SMN1-211ENST00000625245 TMEM247A6NEH6 219 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 TMEM229AB2RXF0 380 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 NPIPB7O75200 414 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 IL6P05231 212 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 KITP10721 976 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 CBR1P16152 277 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 CAPZA2P47755 286 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 MVDP53602 400 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 HOXC5Q00444 222 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 IL1RL1Q01638 556 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 NPRL3Q12980 569 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 C1DQ13901 141 aaKnown RBP16.44■□□□□ 0.22
SMN1-211ENST00000625245 MYPOPQ86VE0 399 aaPredicted RBP16.44■□□□□ 0.22
SMN1-211ENST00000625245 GPR137CQ8N3F9 429 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 NUP37Q8NFH4 326 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 NEU4Q8WWR8 484 aaPredicted RBP16.44■□□□□ 0.22
SMN1-211ENST00000625245 TMEM19Q96HH6 336 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 SPATA9Q9BWV2 254 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 TPT1P8Q9HAU6 139 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 MOV10Q9HCE1 1003 aaKnown RBP16.44■□□□□ 0.22
SMN1-211ENST00000625245 DYNLRB1Q9NP97 96 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 FBXO9Q9UK97 447 aaPredicted RBP16.44■□□□□ 0.22
SMN1-211ENST00000625245 CHST2Q9Y4C5 530 aa16.44■□□□□ 0.22
SMN1-211ENST00000625245 A0A0G2JPF8 293 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 HNRNPCL2B2RXH8 293 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 HNRNPCL3B7ZW38 293 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 HNRNPCL1O60812 293 aaKnown RBP16.43■□□□□ 0.22
SMN1-211ENST00000625245 SLC43A1O75387 559 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 SLC22A3O75751 556 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 IGKV3-15P01624 115 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 HNRNPCL4P0DMR1 293 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 SRP14P37108 136 aaKnown RBP16.43■□□□□ 0.22
SMN1-211ENST00000625245 CHN2P52757 468 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 GTDC1Q4AE62 458 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 ZNF311Q5JNZ3 666 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 HHATQ5VTY9 493 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 FAM169BQ8N8A8 192 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 ANKRD42Q8N9B4 389 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 KTI12Q96EK9 354 aaPredicted RBP16.43■□□□□ 0.22
SMN1-211ENST00000625245 ANKRD27Q96NW4 1050 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 OXGR1Q96P68 337 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 SNX18Q96RF0 628 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 DOK1Q99704 481 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 ZNF442Q9H7R0 627 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 GPR35Q9HC97 309 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 RPS6KB2Q9UBS0 482 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 SEC14L4Q9UDX3 406 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 IFT52Q9Y366 437 aa16.43■□□□□ 0.22
SMN1-211ENST00000625245 IGHV2OR16-5A0A0B4J2B6 119 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 TRPC5OSA6NMA1 111 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 FTCDNL1E5RQL4 147 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 HDAC3O15379 428 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 GIFP27352 417 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 APEX1P27695 318 aaKnown RBP16.42■□□□□ 0.22
SMN1-211ENST00000625245 IL2RGP31785 369 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 EGR4Q05215 589 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 ADRM1Q16186 407 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 CEACAM16Q2WEN9 425 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 UBASH3BQ8TF42 649 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 ITCHQ96J02 903 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 PTDSS2Q9BVG9 487 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 RMND5AQ9H871 391 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 CRLF2Q9HC73 371 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMN1-211ENST00000625245 TMEFF2Q9UIK5 374 aaPredicted RBP16.42■□□□□ 0.22
SMN1-211ENST00000625245 RCE1Q9Y256 329 aa16.42■□□□□ 0.22
SMN1-211ENST00000625245 V9GYY5 206 aaPredicted RBP16.42■□□□□ 0.22
SMN1-211ENST00000625245 TMEM129A0AVI4 362 aa16.41■□□□□ 0.22
SMN1-211ENST00000625245 RPL36A-HNRNPH2H7BZ11 118 aa16.41■□□□□ 0.22
SMN1-211ENST00000625245 LILRA1O75019 489 aa16.41■□□□□ 0.22
SMN1-211ENST00000625245 SEC14L2O76054 403 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms