RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 P2RX1P51575 399 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 HSF2Q03933 536 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 METAP1DQ6UB28 335 aaPredicted RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 HIST3H2AQ7L7L0 130 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 TPRA1Q86W33 373 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 EXD3Q8N9H8 876 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 NFAM1Q8NET5 270 aaPredicted RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 NAT6Q93015 286 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 HIST1H2ACQ93077 130 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 MRPL48Q96GC5 212 aaKnown RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 CCDC74BQ96LY2 380 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 ALG12Q9BV10 488 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 MARCH7Q9H992 704 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 RPRD1BQ9NQG5 326 aaKnown RBP17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 NCDNQ9UBB6 729 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 COPS3Q9UNS2 423 aa17.91■□□□□ 0.46
PCDHB11-202ENST00000624887 TRAV36DV7A0A075B6V5 113 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 A0A1W2PQ09 198 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 C4orf47A7E2U8 309 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 MAGEB4O15481 346 aaPredicted RBP17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 YKT6O15498 198 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SEC14L5O43304 696 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SCO2O43819 266 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 BGLAPP02818 100 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 EVX1P49640 407 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SIRPAP78324 504 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 DCDP81605 110 aaKnown RBP17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SCN1BQ07699 218 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 CDK5R1Q15078 307 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 FAM27D1Q5T7N8 215 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 HBMQ6B0K9 141 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 CNIH2Q6PI25 160 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 TEX19Q8NA77 164 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SMIM19Q96E16 107 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 GRHPRQ9UBQ7 328 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 PPIEQ9UNP9 301 aaKnown RBP17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 MOKQ9UQ07 419 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 NPFFR2Q9Y5X5 522 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SPEGQ15772 3267 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 AGRPO00253 132 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 SSX4O60224 188 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 ALOX12BO75342 701 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 ONECUT2O95948 504 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 CD1AP06126 327 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 CSF3P09919 207 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 MYL9P24844 172 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 EIF2B2P49770 351 aaKnown RBP17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 CD300CQ08708 224 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 ACSM3Q53FZ2 586 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 PYDC2Q56P42 97 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 OVCH1Q7RTY7 1134 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 GAREM1Q9H706 876 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 PPP1R3EQ9H7J1 279 aa17.9■□□□□ 0.46
PCDHB11-202ENST00000624887 MUC3AQ02505 3323 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 ADAM10O14672 748 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 SERPINA3P01011 423 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 PTBP1P26599 531 aaKnown RBP eCLIP17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 POLR2HP52434 150 aaKnown RBP17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 QPRTQ15274 297 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 CCDC58Q4VC31 144 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 ZNF385CQ66K41 422 aaPredicted RBP17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 GPR139Q6DWJ6 353 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 TMEM53Q6P2H8 277 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 RPL22L1Q6P5R6 122 aaKnown RBP17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 POMZP3Q6PJE2 187 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 LYPD4Q6UWN0 246 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 EID2Q8N6I1 236 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 GPR119Q8TDV5 335 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 TSPAN32Q96QS1 320 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 MESP1Q9BRJ9 268 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 SYNDIG1Q9H7V2 258 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 GNG8Q9UK08 70 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 ADAM30Q9UKF2 790 aa17.89■□□□□ 0.45
PCDHB11-202ENST00000624887 A0A1W2PRG6 482 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 VSTM2BA6NLU5 285 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 M0R296 226 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 SNPHO15079 494 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC19A2O60779 497 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 CPNE3O75131 537 aaKnown RBP17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC25A12O75746 678 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 GDI2P50395 445 aaKnown RBP17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC26A5P58743 744 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 EFR3AQ14156 821 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 MESTQ5EB52 335 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 NRARPQ7Z6K4 114 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 MISPQ8IVT2 679 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 NUBPLQ8TB37 319 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 METTL21AQ8WXB1 218 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 KCTD12Q96CX2 325 aaKnown RBP17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TXNDC15Q96J42 360 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TSSK2Q96PF2 358 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 PTDSS2Q9BVG9 487 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 RXFP3Q9NSD7 469 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TECTAO75443 2155 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 PCNX3Q9H6A9 2034 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 FAM171A2A8MVW0 826 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 NPIPB7O75200 414 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 WISP1O95388 367 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 MT-ATP6P00846 226 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 RFX2P48378 723 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms