RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SH3BGRP55822 239 aaPredicted RBP10.95□□□□□ -0.66
LINC00963-217ENST00000624009 FAPQ12884 760 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 GABRA6Q16445 453 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 RABL3Q5HYI8 236 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 KLHL17Q6TDP4 642 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 HACD2Q6Y1H2 254 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 GPAT4Q86UL3 456 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 EPHX4Q8IUS5 362 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 SMYD1Q8NB12 490 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 GPR32P1Q8NGA4 272 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 SLC26A7Q8TE54 656 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 TAAR8Q969N4 342 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 TAMM41Q96BW9 452 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
LINC00963-217ENST00000624009 CCL19Q99731 98 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 HOPXQ9BPY8 73 aaPredicted RBP10.95□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF426Q9BUY5 554 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 GSX2Q9BZM3 304 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 SLC7A10Q9NS82 523 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 B3GAT1Q9P2W7 334 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 AMDHD2Q9Y303 409 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 SLC25A15Q9Y619 301 aa10.95□□□□□ -0.66
LINC00963-217ENST00000624009 LOC100653049A0A140TA62 436 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 TRAPPC13A5PLN9 417 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 CCT8L1PA6NM43 557 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 FAM220BPB1ANY3 271 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 RPL36A-HNRNPH2H7BZ11 118 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 SMPD2O60906 423 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 KRT34O76011 436 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 PTAFRP25105 342 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 CDH12P55289 794 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 TSC22D1Q15714 1073 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 TSPO2Q5TGU0 170 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 TMEM108Q6UXF1 575 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 OR6T1Q8NGN1 323 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
LINC00963-217ENST00000624009 PROX1Q92786 737 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 FBXW5Q969U6 566 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 DNAJA3Q96EY1 480 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 LRR1Q96L50 414 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 MCHR1Q99705 422 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 CXorf56Q9H5V9 222 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 UBTD1Q9HAC8 227 aa10.94□□□□□ -0.66
LINC00963-217ENST00000624009 MRPL39Q9NYK5 338 aaKnown RBP10.94□□□□□ -0.66
LINC00963-217ENST00000624009 SONP18583 2426 aaKnown RBP10.94□□□□□ -0.66
LINC00963-217ENST00000624009 JMJD1CQ15652 2540 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 HTR3EA5X5Y0 456 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 DPRXA6NFQ7 191 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF587BE7ETH6 402 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 M0R082 166 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 M0R3H8 397 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 RAD51DO75771 328 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 WNT11O96014 354 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 IGHV3-9P01782 118 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 BGLAPP02818 100 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 THRBP10828 461 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 GRPRP30550 384 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ADAM8P78325 824 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 BSPH1Q075Z2 132 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 NPTX1Q15818 432 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 STK11Q15831 433 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 C3orf36Q3SXR2 165 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF672Q499Z4 452 aaPredicted RBP10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ENTPD8Q5MY95 495 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.93□□□□□ -0.66
LINC00963-217ENST00000624009 SPATA21Q7Z572 469 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 PXKQ7Z7A4 578 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 OR2T12Q8NG77 320 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF417Q8TAU3 575 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ADAMTS16Q8TE57 1224 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 TMEM171Q8WVE6 324 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 SLC25A36Q96CQ1 311 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 CMTM5Q96DZ9 223 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF587Q96SQ5 575 aaPredicted RBP10.93□□□□□ -0.66
LINC00963-217ENST00000624009 WFDC6Q9BQY6 131 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ASPNQ9BXN1 380 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 NSRP1Q9H0G5 558 aaKnown RBP10.93□□□□□ -0.66
LINC00963-217ENST00000624009 EFCAB1Q9HAE3 211 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 SLC17A5Q9NRA2 495 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 ZNF701Q9NV72 531 aaPredicted RBP10.93□□□□□ -0.66
LINC00963-217ENST00000624009 FAIMQ9NVQ4 179 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 NOX1Q9Y5S8 564 aa10.93□□□□□ -0.66
LINC00963-217ENST00000624009 TRAF3IP2O43734 574 aaPredicted RBP10.92□□□□□ -0.66
LINC00963-217ENST00000624009 SLC43A1O75387 559 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 OPN1SWP03999 348 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 DANCRP0C864 163 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 COX4I1P13073 169 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 CD99P14209 185 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 PRDX6P30041 224 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 RBM34P42696 430 aaKnown RBP10.92□□□□□ -0.66
LINC00963-217ENST00000624009 PRPS1P60891 318 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
LINC00963-217ENST00000624009 PUDPQ08623 228 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 ETFDHQ16134 617 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 C8orf82Q6P1X6 216 aaPredicted RBP10.92□□□□□ -0.66
LINC00963-217ENST00000624009 CCDC36Q8IYA8 594 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 PIK3C3Q8NEB9 887 aa10.92□□□□□ -0.66
LINC00963-217ENST00000624009 LILRB1Q8NHL6 650 aaPredicted RBP10.92□□□□□ -0.66
LINC00963-217ENST00000624009 LZICQ8WZA0 190 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms