RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 UBE2NLQ5JXB2 153 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 ACSM2BQ68CK6 577 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 ASTLQ6HA08 431 aaPredicted RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 LPCAT3Q6P1A2 487 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 CDC73Q6P1J9 531 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 MTFR2Q6P444 385 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 C22orf39Q6P5X5 142 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 CD300LDQ6UXZ3 194 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 TECPR1Q7Z6L1 1165 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 THOC6Q86W42 341 aaKnown RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 NPAS3Q8IXF0 933 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 LRRC56Q8IYG6 542 aaPredicted RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 GPR137CQ8N3F9 429 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 BOLLQ8N9W6 283 aaKnown RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 PNLDC1Q8NA58 520 aaKnown RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 IFI44Q8TCB0 444 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 BRIX1Q8TDN6 353 aaKnown RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 MAFIPQ8WZ33 124 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 IGSF21Q96ID5 467 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 LMLNQ96KR4 655 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 RSRP1Q9BUV0 290 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 LAT2Q9GZY6 243 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 OR52A5Q9H2C5 316 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 SPG21Q9NZD8 308 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 ZNF282Q9UDV7 671 aaPredicted RBP6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 TIMM10BQ9Y5J6 103 aa6.91□□□□□ -1.3
TRIM49B-202ENST00000622138 OR2AG2A6NM03 316 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 A8MWP6 167 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 IDSB3KWA1 339 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 FAM227AF5H4B4 570 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 IGHA1P01876 353 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 GBAP04062 536 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 ASGR2P07307 311 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 OR4E1P0C645 316 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SFTA3P0C7M3 94 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 CTSAP10619 480 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 CLUP10909 449 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 ATP1B2P14415 290 aaPredicted RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 ELAVL4P26378 380 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 FAUP35544 74 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 MAPK8P45983 427 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SPINT3P49223 89 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 PRKXP51817 358 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SUCLG1P53597 346 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 CDK6Q00534 326 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SRSF4Q08170 494 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SCARB2Q14108 478 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 KIAA0141Q14154 515 aaPredicted RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 DCST1Q5T197 706 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 CPTPQ5TA50 214 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 DCAF12L2Q5VW00 463 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 C11orf88Q6PI97 169 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 ACOT7LQ6ZUV0 252 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 DPPA4Q7L190 304 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 HSD11B1LQ7Z5J1 315 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 TMCO2Q7Z6W1 182 aaPredicted RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 PEG10Q86TG7 708 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 LRRTM1Q86UE6 522 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 RANBP3LQ86VV4 465 aaPredicted RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 CMTM8Q8IZV2 173 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 ZNF614Q8N883 585 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 TEX19Q8NA77 164 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 OR4K1Q8NGD4 311 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 NUDCD2Q8WVJ2 157 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 ZNF385AQ96PM9 386 aaKnown RBP6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 SUCNR1Q9BXA5 334 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 WDR13Q9H1Z4 485 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 TMEM38AQ9H6F2 299 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 PRDM7Q9NQW5 492 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 MED17Q9NVC6 651 aa6.9□□□□□ -1.3
TRIM49B-202ENST00000622138 PDE4DIPQ5VU43 2346 aa6.9□□□□□ -1.31
TRIM49B-202ENST00000622138 A0A0A6YYC8 382 aaPredicted RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 TRBV4-1A0A0J9YWV2 114 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 A0A1W2PPH5 198 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 ZNF705EA8MWA4 302 aaPredicted RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 I3L1I5 382 aaPredicted RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 ITGB1BP1O14713 200 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 ANXA4P09525 319 aaPredicted RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 METTL15P1P0C7V9 234 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 OR12D1P0DN82 309 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 C6P13671 934 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 TPT1P13693 172 aaKnown RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 GPR3P46089 330 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 OMPP47874 163 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 CAV2P51636 162 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 SMIM11AP58511 58 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 SKP1P63208 163 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 MC1RQ01726 317 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 NAAAQ02083 359 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 INSL4Q14641 139 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 C2orf68Q2NKX9 166 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 PLEKHS1Q5SXH7 462 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 GRHL2Q6ISB3 625 aa6.89□□□□□ -1.31
TRIM49B-202ENST00000622138 PGBD2Q6P3X8 592 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms