RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	IFNG	P01579	166 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	PLA2G7	Q13093	441 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	ADAMTSL4	Q6UY14	1074 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF546	Q86UE3	836 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	COX18	Q8N8Q8	333 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR4K13	Q8NH42	304 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	COX14	Q96I36	57 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	CRB3	Q9BUF7	120 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	TMEM27	Q9HBJ8	222 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	NRIP3	Q9NQ35	241 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	SPHK1	Q9NYA1	384 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	NDRG3	Q9UGV2	375 aa		13.21	□□□□□ -0.29
SYNRG-231	ENST00000622045	TRAV1-2	A0A0B4J238	106 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	CTDSPL	O15194	276 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF806	P0C7X5	589 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	SRM	P19623	302 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	CMPK1	P30085	196 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	MANEA	Q5SRI9	462 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	RAB11FIP2	Q7L804	512 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR4E2	Q8NGC2	313 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR52E2	Q8NGJ4	325 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	LRRC3B	Q96PB8	259 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	SDF2	Q99470	211 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	GFI1	Q99684	422 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	JAM3	Q9BX67	310 aa		13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	MBNL1	Q9NR56	388 aa	Known RBP	13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045	MKI67	P46013	3256 aa	Known RBP	13.21	□□□□□ -0.3
SYNRG-231	ENST00000622045		A0A1B0GW55	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMEM200C	A6NKL6	621 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	PEX12	O00623	359 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	SGCE	O43556	437 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4L2	P0CJ85	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4L3	P0CJ86	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4L4	P0CJ87	422 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4L5	P0CJ88	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4L6	P0CJ89	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4L7	P0CJ90	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	CD53	P19397	219 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZIC1	Q15915	447 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMEM52B	Q4KMG9	183 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DEFB134	Q4QY38	66 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	AKIRIN2	Q53H80	203 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMED4	Q7Z7H5	227 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR2L3	Q8NG85	312 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR4K14	Q8NGD5	310 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF681	Q96N22	645 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TNFRSF13C	Q96RJ3	184 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	DUX4	Q9UBX2	424 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	CACNA1C	Q13936	2221 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	KNL1	Q8NG31	2342 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMEM272	A0A1B0GTI8	110 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	LRRC72	A6NJI9	287 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	PIN1P1	O15428	100 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	FGF19	O95750	216 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	SPP1	P10451	314 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ACTC1	P68032	377 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ACTA1	P68133	377 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	GUCA2A	Q02747	115 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ASPG	Q86U10	573 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	EIF4E3	Q8N5X7	224 aa	Known RBP	13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	NKX3-1	Q99801	234 aa	Predicted RBP	13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	PRSS27	Q9BQR3	290 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TMEM231	Q9H6L2	316 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	IL21R	Q9HBE5	538 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	BIN3	Q9NQY0	253 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	FOXJ3	Q9UPW0	622 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TRBV23OR9-2	A0A075B6M9	112 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	IFITM5	A6NNB3	132 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	SNRPGP15	A8MWD9	76 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	RPP14	O95059	124 aa	Known RBP	13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	AKR7A3	O95154	331 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	LIPC	P11150	499 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	MPG	P29372	298 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	CAPZA2	P47755	286 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF136	P52737	540 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	TRMT12	Q53H54	448 aa	Known RBP	13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	SDR9C7	Q8NEX9	313 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	ANKRD10	Q9NXR5	420 aa		13.2	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR6C68	A6NDL8	312 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF860	A6NHJ4	632 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	T	O15178	435 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZNF888	P0CJ79	500 aa	Predicted RBP	13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	ITPKB	P27987	946 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	HTR2A	P28223	471 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	TLX1	P31314	330 aa	Predicted RBP	13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	SIRPA	P78324	504 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	CDK5R1	Q15078	307 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	AMZ1	Q400G9	498 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	RPL13AP3	Q6NVV1	102 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	RNF113B	Q8IZP6	322 aa	Known RBP	13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR4C16	Q8NGL9	310 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	OR1S2	Q8NGQ3	325 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	TBC1D3E	A0A087X179	549 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	FAM171A2	A8MVW0	826 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	NARS	O43776	548 aa	Known RBP	13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	IL5	P05113	134 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	CEBPB	P17676	345 aa		13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	RPS11	P62280	158 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
SYNRG-231	ENST00000622045	ZCCHC12	Q6PEW1	402 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms