RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SPIBQ01892 262 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 FBXL19-AS1Q494R0 122 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 RRM2BQ7LG56 351 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 PIWIL3Q7Z3Z3 882 aaKnown RBP16.5■□□□□ 0.23
CIRBP-245ENST00000621399 STK32CQ86UX6 486 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 MED12LQ86YW9 2145 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 NRMQ8IXM6 262 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 RNF113BQ8IZP6 322 aaKnown RBP16.5■□□□□ 0.23
CIRBP-245ENST00000621399 LRRC17Q8N6Y2 441 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 ADPRHL1Q8NDY3 354 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 OR5J2Q8NH18 312 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 OR52J3Q8NH60 311 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 RNASE6Q93091 150 aaKnown RBP16.5■□□□□ 0.23
CIRBP-245ENST00000621399 FKRPQ9H9S5 495 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 MRPL39Q9NYK5 338 aaKnown RBP16.5■□□□□ 0.23
CIRBP-245ENST00000621399 ZNF229Q9UJW7 825 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 AURKCQ9UQB9 309 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 FLVCR1Q9Y5Y0 555 aa16.5■□□□□ 0.23
CIRBP-245ENST00000621399 A0A087WUU8 490 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 DHRS12A0PJE2 317 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 HTR3EA5X5Y0 456 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 MRPL33O75394 65 aaKnown RBP16.49■□□□□ 0.23
CIRBP-245ENST00000621399 OR6A2O95222 327 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 IFI30P13284 250 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 FUT1P19526 365 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 LSM11P83369 360 aaKnown RBP eCLIP16.49■□□□□ 0.234e-13■■□□□ 14.1
CIRBP-245ENST00000621399 C1DQ13901 141 aaKnown RBP16.49■□□□□ 0.23
CIRBP-245ENST00000621399 EXOC3L2Q2M3D2 409 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 SP5Q6BEB4 398 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-245ENST00000621399 PODNL1Q6PEZ8 512 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 ZNF474Q6S9Z5 364 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-245ENST00000621399 TBPL2Q6SJ96 375 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 MBOAT2Q6ZWT7 520 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 CREB3L2Q70SY1 520 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 ZNF100Q8IYN0 542 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 ADGRG5Q8IZF4 528 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 SLC7A13Q8TCU3 470 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 BPIFA2Q96DR5 249 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 DHRS1Q96LJ7 313 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 OXGR1Q96P68 337 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 NPDC1Q9NQX5 325 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-245ENST00000621399 PARPBPQ9NWS1 579 aa16.49■□□□□ 0.23
CIRBP-245ENST00000621399 FOXD3Q9UJU5 478 aaPredicted RBP16.49■□□□□ 0.23
CIRBP-245ENST00000621399 TRBV4-1A0A0J9YWV2 114 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 MS4A18H0YCH9 400 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 PLPP3O14495 311 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 OR7A10O76100 309 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 GADD45GO95257 159 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 RAP2AP10114 183 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 ZNF43P17038 809 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 AHCYP23526 432 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 RRM2P31350 389 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 MAGEA2P43356 314 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 ERFP50548 548 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 POU4F3Q15319 338 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 MS4A18Q3C1V0 323 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 C1orf146Q5VVC0 180 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 TFAP2EQ6VUC0 442 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.48■□□□□ 0.23
CIRBP-245ENST00000621399 SLC46A3Q7Z3Q1 461 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 CDK20Q8IZL9 346 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 ZIC4Q8N9L1 334 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 CANT1Q8WVQ1 401 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 APH1AQ96BI3 265 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 GALNT8Q9NY28 637 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 DOPEY2Q9Y3R5 2298 aa16.48■□□□□ 0.23
CIRBP-245ENST00000621399 LOC102725191A0A1B0GVB3 256 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 CIB2O75838 187 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 HPRP00739 348 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 ASAH2BP0C7U1 165 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 ADORA3P0DMS8 318 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 COL8A1P27658 744 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 NTF4P34130 210 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 OR3A2P47893 321 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 PRKCDQ05655 676 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 PUDPQ08623 228 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 CASP12Q6UXS9 341 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 BEND4Q6ZU67 534 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 AAED1Q7RTV5 226 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 NANOGNBQ7Z5D8 188 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 EPHX4Q8IUS5 362 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 UEVLDQ8IX04 471 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 TMEM45BQ96B21 275 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 ZNF385AQ96PM9 386 aaKnown RBP16.47■□□□□ 0.23
CIRBP-245ENST00000621399 CHID1Q9BWS9 393 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 FANCFQ9NPI8 374 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 B3GAT1Q9P2W7 334 aa16.47■□□□□ 0.23
CIRBP-245ENST00000621399 TCRBV3S1A0A5B6 114 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 EFCAB9A8MZ26 197 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 BLOC1S5-TXNDC5H3BN57 136 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 KRT36O76013 467 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 SAGP10523 405 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-245ENST00000621399 POU2F1P14859 743 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 HOXB6P17509 224 aaKnown RBP16.46■□□□□ 0.23
CIRBP-245ENST00000621399 MAKP20794 623 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 FAM27E3Q08E93 113 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 SEC23BQ15437 767 aa16.46■□□□□ 0.23
CIRBP-245ENST00000621399 MEX3DQ86XN8 651 aaKnown RBP16.46■□□□□ 0.23
CIRBP-245ENST00000621399 KIF18BQ86Y91 864 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms